Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   LU301_RS11035 Genome accession   NZ_CP089978
Coordinates   2200003..2201175 (+) Length   390 a.a.
NCBI ID   WP_305270774.1    Uniprot ID   -
Organism   Moraxella sp. ZY210820     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2195003..2206175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LU301_RS11005 (LU301_10995) - 2195049..2195741 (-) 693 WP_305270762.1 hypothetical protein -
  LU301_RS11010 (LU301_11000) hisG 2195803..2196480 (-) 678 WP_370692262.1 ATP phosphoribosyltransferase -
  LU301_RS11015 (LU301_11005) murA 2196481..2197740 (-) 1260 WP_305270766.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  LU301_RS11020 (LU301_11010) ibaG 2197743..2197994 (-) 252 WP_305270768.1 BolA family iron metabolism protein IbaG -
  LU301_RS11025 (LU301_11015) def 2198148..2198666 (-) 519 WP_305270770.1 peptide deformylase -
  LU301_RS11030 (LU301_11020) tsaP 2198793..2199968 (+) 1176 WP_305270772.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  LU301_RS11035 (LU301_11025) dprA 2200003..2201175 (+) 1173 WP_305270774.1 DNA-processing protein DprA Machinery gene
  LU301_RS11040 (LU301_11030) - 2201177..2201743 (+) 567 WP_305270777.1 Sua5/YciO/YrdC/YwlC family protein -
  LU301_RS11045 (LU301_11035) - 2201955..2202941 (+) 987 WP_370692263.1 mechanosensitive ion channel family protein -
  LU301_RS11055 (LU301_11045) - 2203562..2204686 (+) 1125 WP_305270781.1 tyrosine-type recombinase/integrase -
  LU301_RS11060 (LU301_11050) - 2204693..2204890 (-) 198 WP_305270784.1 hypothetical protein -
  LU301_RS11065 (LU301_11055) - 2204894..2205064 (-) 171 WP_305270787.1 hypothetical protein -
  LU301_RS11070 (LU301_11060) - 2205067..2205531 (-) 465 WP_305270790.1 DUF551 domain-containing protein -

Sequence

Protein


Download         Length: 390 a.a.        Molecular weight: 43650.56 Da        Isoelectric Point: 6.8997

>NTDB_id=639640 LU301_RS11035 WP_305270774.1 2200003..2201175(+) (dprA) [Moraxella sp. ZY210820]
MLHQISEVLLHRIKLWYLVQHSLTTYHHLIQYFGSAELATQDNALRQWENLTIHSSHKQRATQYLQNPQAFFHCLQQLCD
YCDFILADDDEHYPEQLKPYNDRSPLIFGQGDLSILTQAQIAIVGSRKPSAHGPKIAYDFAHYLAEKGYYITSGLANGID
TAAHHAGVKFQKTIAVIGSGLDQVYPAANRPLQQQIIAQHGAILTEFLPTTPPLQHHFPRRNRIISGLSLGTLVVEAAIK
SGSLSTAKWALEQGKTVFAIPGHIQSEYHRGCHLLIREGAILVDEPQQIIDELQQTVQWQTSSYIPTPTVSSSKKQPTNV
TTQNNLAFQQNQADVPAHLQHLYQHLDFTGLDIDQLNAKTGLAITDLTAQLMELELLGLSLQRAGLFLRA

Nucleotide


Download         Length: 1173 bp        

>NTDB_id=639640 LU301_RS11035 WP_305270774.1 2200003..2201175(+) (dprA) [Moraxella sp. ZY210820]
ATGTTGCACCAAATTAGTGAAGTTTTGCTCCATCGCATTAAACTCTGGTATTTGGTGCAACATTCTTTAACCACCTATCA
TCATTTAATTCAATATTTTGGTTCAGCAGAATTAGCCACCCAAGATAATGCTTTAAGACAATGGGAAAATCTTACTATCC
ATAGTTCCCACAAACAGCGAGCCACACAATATCTACAAAATCCACAAGCTTTTTTTCATTGCTTACAGCAATTATGTGAT
TATTGTGATTTTATCCTTGCTGATGACGATGAACATTATCCTGAACAATTAAAACCTTATAATGACCGTTCACCTTTAAT
TTTTGGTCAAGGTGATTTATCAATATTAACGCAAGCTCAAATTGCTATTGTTGGCAGTCGCAAACCGAGTGCTCATGGCC
CCAAAATTGCCTATGATTTTGCACATTATTTAGCTGAAAAAGGTTATTATATTACCAGTGGTTTAGCTAATGGTATCGAT
ACAGCAGCTCATCATGCAGGAGTTAAATTTCAAAAAACTATTGCCGTAATTGGTTCTGGTTTAGACCAAGTATATCCTGC
CGCCAATCGTCCATTACAGCAACAGATTATTGCTCAACACGGTGCAATCTTAACAGAGTTTTTACCTACCACACCGCCTT
TACAGCATCATTTTCCTAGACGGAATCGTATTATTAGTGGTTTAAGTTTAGGTACATTGGTGGTTGAAGCTGCCATTAAA
AGTGGCTCACTGAGTACTGCCAAATGGGCTTTAGAACAAGGCAAAACTGTATTTGCCATTCCAGGGCATATTCAAAGTGA
ATATCATCGTGGGTGTCATTTATTAATTCGTGAAGGGGCTATTCTAGTTGATGAGCCACAACAAATCATTGATGAATTAC
AACAAACAGTACAATGGCAAACTTCATCTTACATTCCAACTCCAACAGTTTCATCATCTAAGAAACAACCTACAAATGTT
ACAACTCAAAATAATTTAGCATTCCAACAGAATCAAGCCGATGTACCAGCACATTTACAACATTTATATCAACATTTAGA
TTTTACAGGTTTAGACATTGACCAATTGAATGCTAAAACAGGATTAGCCATTACCGATTTAACCGCTCAGCTCATGGAAC
TTGAATTATTGGGATTAAGTTTACAACGTGCAGGATTATTTTTACGAGCCTAA

Domains

Predicted by InterproScan.

DprA winged helix domain (DprA_WH)

(331-385)

DNA recombination-mediator protein A (DNA_processg_A)

(87-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

53.944

100

0.544
  dprA Acinetobacter baumannii D1279779

53.571

100

0.538
  dprA Acinetobacter baylyi ADP1

52.356

97.949

0.513