Detailed information NTG0639408

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LXA49_RS04850
• Genome accession: NZ_CP089949
• Coordinates: 942241..943194 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495896.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SN75752
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 937241..948194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXA49_RS04825 (LXA49_04810)	rpmG	937984..938133 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
LXA49_RS04830 (LXA49_04815)	secG	938173..938406 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
LXA49_RS04835 (LXA49_04820)	rnr	938508..940862 (+)	2355	WP_000654871.1	ribonuclease R	-
LXA49_RS04840 (LXA49_04825)	smpB	940825..941292 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
LXA49_RS04845 (LXA49_04830)	tehB	941308..942168 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
LXA49_RS04850 (LXA49_04835)	coiA	942241..943194 (+)	954	WP_000495896.1	competence protein CoiA	Machinery gene
LXA49_RS04855 (LXA49_04840)	pepF	943213..945015 (+)	1803	WP_000244124.1	oligoendopeptidase F	Regulator
LXA49_RS04860 (LXA49_04845)	-	945017..945730 (+)	714	WP_001810028.1	O-methyltransferase	-
LXA49_RS04865 (LXA49_04850)	prsA	945797..946738 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
LXA49_RS04870 (LXA49_04855)	-	946857..947198 (-)	342	Protein_974	IS3 family transposase	-
LXA49_RS04875 (LXA49_04860)	-	947610..947705 (+)	96	Protein_975	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=639408 LXA49_RS04850 WP_000495896.1 942241..943194(+) (coiA) [Streptococcus pneumoniae strain SN75752]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=639408 LXA49_RS04850 WP_000495896.1 942241..943194(+) (coiA) [Streptococcus pneumoniae strain SN75752]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429