Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   LVO52_RS14705 Genome accession   NZ_CP089768
Coordinates   2993557..2994153 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain HKE9     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2988557..2999153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVO52_RS14690 (LVO52_14660) helD 2988765..2990819 (-) 2055 WP_004179218.1 DNA helicase IV -
  LVO52_RS14695 (LVO52_14665) - 2990944..2991390 (+) 447 WP_002898425.1 YccF domain-containing protein -
  LVO52_RS14700 (LVO52_14670) yccS 2991408..2993543 (+) 2136 WP_002898422.1 YccS family putative transporter -
  LVO52_RS14705 (LVO52_14675) sxy/tfoX 2993557..2994153 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  LVO52_RS14710 (LVO52_14680) sulA 2994502..2995011 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  LVO52_RS14715 (LVO52_14685) ompA 2995364..2996434 (+) 1071 WP_002898408.1 porin OmpA -
  LVO52_RS14720 (LVO52_14690) matP 2996566..2997018 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  LVO52_RS14725 (LVO52_14695) - 2997204..2998961 (+) 1758 WP_277693090.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=638542 LVO52_RS14705 WP_004150836.1 2993557..2994153(-) (sxy/tfoX) [Klebsiella pneumoniae strain HKE9]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=638542 LVO52_RS14705 WP_004150836.1 2993557..2994153(-) (sxy/tfoX) [Klebsiella pneumoniae strain HKE9]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51