Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | ND436_RS02345 | Genome accession | NZ_CP106918 |
| Coordinates | 451809..452750 (+) | Length | 313 a.a. |
| NCBI ID | WP_047920195.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 9071 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 446809..457750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND436_RS02320 (ND436_002320) | - | 447458..447967 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| ND436_RS02325 (ND436_002325) | - | 448199..448780 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| ND436_RS02330 (ND436_002330) | dnaB | 448944..450350 (+) | 1407 | WP_003699622.1 | replicative DNA helicase | - |
| ND436_RS02335 (ND436_002335) | pilH | 450504..451169 (+) | 666 | WP_260253300.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ND436_RS02340 (ND436_002340) | pilV | 451201..451812 (+) | 612 | WP_003699626.1 | type IV pilus modification protein PilV | Regulator |
| ND436_RS02345 (ND436_002345) | pilJ | 451809..452750 (+) | 942 | WP_047920195.1 | PilW family protein | Machinery gene |
| ND436_RS02350 (ND436_002350) | pilK | 452729..453340 (+) | 612 | WP_033911077.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ND436_RS02355 (ND436_002355) | pilL | 453342..453815 (+) | 474 | WP_260253376.1 | PilX family type IV pilin | Machinery gene |
| ND436_RS02360 (ND436_002360) | - | 453885..454193 (-) | 309 | WP_025456177.1 | AzlD family protein | - |
| ND436_RS02365 (ND436_002365) | - | 454190..454900 (-) | 711 | Protein_465 | AzlC family ABC transporter permease | - |
| ND436_RS02370 (ND436_002370) | dut | 455066..455518 (+) | 453 | WP_003699637.1 | dUTP diphosphatase | - |
| ND436_RS02375 (ND436_002375) | dapC | 455594..456781 (+) | 1188 | WP_003699639.1 | succinyldiaminopimelate transaminase | - |
| ND436_RS02380 (ND436_002380) | yaaA | 456937..457716 (+) | 780 | WP_003699641.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 34486.21 Da Isoelectric Point: 9.1777
>NTDB_id=638541 ND436_RS02345 WP_047920195.1 451809..452750(+) (pilJ) [Neisseria gonorrhoeae strain 9071]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTVVSSCAA
ISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIKRMRVRY
IYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTVVSSCAA
ISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIKRMRVRY
IYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 942 bp
>NTDB_id=638541 ND436_RS02345 WP_047920195.1 451809..452750(+) (pilJ) [Neisseria gonorrhoeae strain 9071]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAAATTTTTCCAGGTTA
GTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCA
ATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGAGCA
AAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGATGAGCAAGGTTTGTTCC
GCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTAT
ATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTC
TGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTT
ATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATCAGAAATTTTTCCAGGTTA
GTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTCGTCAGCAGCTGTGCCGCA
ATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGAGCA
AAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGATGAGCAAGGTTTGTTCC
GCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAACGTATGAGAGTGCGGTAT
ATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATACGGATAAATTCGACAGCTC
TGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTTCTTCAGATAATATTATTT
ATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
93.93 |
100 |
0.939 |