Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   LUY98_RS02130 Genome accession   NZ_CP089497
Coordinates   395489..396175 (+) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain 3045_IIV_ST8     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 390489..401175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUY98_RS02095 yqeH 391016..392116 (+) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -
  LUY98_RS02100 aroE 392130..392936 (+) 807 WP_000666750.1 shikimate dehydrogenase -
  LUY98_RS02105 yhbY 392940..393230 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  LUY98_RS02110 nadD 393233..393802 (+) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  LUY98_RS02115 yqeK 393792..394376 (+) 585 WP_001017837.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  LUY98_RS02120 rsfS 394377..394730 (+) 354 WP_001088020.1 ribosome silencing factor -
  LUY98_RS02125 - 394733..395449 (+) 717 WP_000084840.1 class I SAM-dependent methyltransferase -
  LUY98_RS02130 comEA 395489..396175 (+) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  LUY98_RS02135 - 396267..396728 (+) 462 WP_000439693.1 ComE operon protein 2 -
  LUY98_RS02140 - 396733..398934 (+) 2202 Protein_386 DNA internalization-related competence protein ComEC/Rec2 -
  LUY98_RS02145 holA 398991..399965 (+) 975 WP_001282573.1 DNA polymerase III subunit delta -
  LUY98_RS02150 rpsT 400010..400261 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=637553 LUY98_RS02130 WP_072468915.1 395489..396175(+) (comEA) [Staphylococcus aureus strain 3045_IIV_ST8]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=637553 LUY98_RS02130 WP_072468915.1 395489..396175(+) (comEA) [Staphylococcus aureus strain 3045_IIV_ST8]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACACCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961