Detailed information NTG0634207

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LRO84_RS10140
• Genome accession: NZ_CP088955
• Coordinates: 2135057..2135758 (-)
• Length: 233 a.a.
• NCBI ID: WP_231761257.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain ARu19
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2130057..2140758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO84_RS10110 (LRO84_10110)	-	2130369..2130809 (-)	441	WP_004642638.1	SRPBCC family protein	-
LRO84_RS10115 (LRO84_10115)	tadA	2130879..2131382 (-)	504	WP_231761253.1	tRNA adenosine(34) deaminase TadA	-
LRO84_RS10120 (LRO84_10120)	-	2131388..2132512 (-)	1125	WP_231761254.1	enoyl-CoA hydratase/isomerase family protein	-
LRO84_RS10125 (LRO84_10125)	ung	2132509..2133222 (-)	714	WP_231761255.1	uracil-DNA glycosylase	-
LRO84_RS10130 (LRO84_10130)	-	2133272..2133868 (-)	597	WP_003651480.1	6-pyruvoyl trahydropterin synthase family protein	-
LRO84_RS10135 (LRO84_10135)	gspK	2134098..2135057 (-)	960	WP_231761256.1	type II secretion system minor pseudopilin GspK	-
LRO84_RS10140 (LRO84_10140)	xcpW	2135057..2135758 (-)	702	WP_231761257.1	type II secretion system minor pseudopilin GspJ	Machinery gene
LRO84_RS10145 (LRO84_10145)	xcpV	2135758..2136138 (-)	381	WP_004642631.1	type II secretion system minor pseudopilin GspI	Machinery gene
LRO84_RS10150 (LRO84_10150)	-	2136128..2136682 (-)	555	WP_231761258.1	type II secretion system protein	-
LRO84_RS10155 (LRO84_10155)	-	2136692..2137300 (-)	609	WP_004642629.1	TetR/AcrR family transcriptional regulator	-
LRO84_RS10160 (LRO84_10160)	-	2137337..2138110 (-)	774	WP_005041098.1	TatD family hydrolase	-
LRO84_RS10165 (LRO84_10165)	-	2138128..2138469 (-)	342	WP_003651467.1	PilZ domain-containing protein	-
LRO84_RS10170 (LRO84_10170)	-	2138480..2139460 (-)	981	WP_231761259.1	DNA polymerase III subunit delta'	-
LRO84_RS10175 (LRO84_10175)	kdsB	2139474..2140235 (-)	762	WP_231761260.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26667.69 Da
• Isoelectric Point: 10.1903

>NTDB_id=634207 LRO84_RS10140 WP_231761257.1 2135057..2135758(-) (xcpW) [Acinetobacter calcoaceticus strain ARu19]
MIKNKYFRSRSTASRLAARSNRARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAQHEVQLFELQDAYQQ
VLRDTLQIIPLSANQGGQLHPALELDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLS
STLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKGIKIQLTVAGVSYEWIYSLNQGNLSLSKQGGA

Nucleotide

• Length: 702 bp

>NTDB_id=634207 LRO84_RS10140 WP_231761257.1 2135057..2135758(-) (xcpW) [Acinetobacter calcoaceticus strain ARu19]
ATGATAAAAAATAAATATTTTCGCTCTCGAAGCACAGCTTCACGTCTTGCAGCACGATCGAACAGGGCTCGATTAACTCG
TGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTCGCAATTGCAATTTTTGCTGTTTTATCTTTGTTAGGTTGGAAGATTT
TTGATTATTTATTAAAAGTCCGTGATCGTAATGCTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCGTATCAACAA
GTTTTGCGAGATACATTACAAATTATACCCTTATCGGCAAATCAAGGGGGGCAGCTTCATCCAGCATTAGAACTTGATAA
TCAAGTTCTTCGCTTTAGTAAGGCTGGTGTTACTGATCCTTTAAAACAAGGGTTATCACCTTTTGAGCGTATTGAATATC
GATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGCAATTTAAATACTTCAAACAGAGAGCAACCTTTATCT
AGCACTTTGTTGAGTCAAGTTGAACAGTTTCAAATTATGGTGCTCACACCACAAGAAGTGACAAAGTGGCCAGAAATTAA
TATTGATCCCACAAAGCCAGAAGAGTTTAGAAAACTGCCGAAAGGAATAAAAATACAACTCACAGTTGCTGGTGTAAGTT
ATGAGTGGATTTATAGCTTAAACCAAGGGAATTTATCGCTCTCCAAACAAGGAGGAGCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	89.27	100	0.893