Detailed information NTG0634196

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: LRO84_RS01720
• Genome accession: NZ_CP088955
• Coordinates: 366660..370514 (+)
• Length: 1284 a.a.
• NCBI ID: WP_231762432.1
• Uniprot ID: -
• Organism: Acinetobacter calcoaceticus strain ARu19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 361660..375514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LRO84_RS01690 (LRO84_01690)	gmk	361941..362570 (-)	630	WP_003653783.1	guanylate kinase	-
LRO84_RS01695 (LRO84_01695)	ispH	362693..363643 (+)	951	WP_003653781.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
LRO84_RS01700 (LRO84_01700)	fimU	363814..364287 (+)	474	WP_003653780.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
LRO84_RS01705 (LRO84_01705)	pilV	364281..364841 (+)	561	WP_003653778.1	type IV pilus modification protein PilV	Machinery gene
LRO84_RS01710 (LRO84_01710)	pilW	364841..365842 (+)	1002	WP_231762430.1	PilW family protein	Machinery gene
LRO84_RS01715 (LRO84_01715)	pilX	365839..366648 (+)	810	WP_231762431.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
LRO84_RS01720 (LRO84_01720)	pilY1	366660..370514 (+)	3855	WP_231762432.1	PilC/PilY family type IV pilus protein	Machinery gene
LRO84_RS01725 (LRO84_01725)	pilY2	370525..371007 (+)	483	WP_231762433.1	type IV pilin protein	Machinery gene
LRO84_RS01730 (LRO84_01730)	pilE	371004..371429 (+)	426	WP_231762434.1	type IV pilin protein	Machinery gene
LRO84_RS01735 (LRO84_01735)	rpsP	371577..371828 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
LRO84_RS01740 (LRO84_01740)	rimM	371850..372398 (+)	549	WP_009392005.1	ribosome maturation factor RimM	-
LRO84_RS01745 (LRO84_01745)	trmD	372441..373196 (+)	756	WP_231762435.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
LRO84_RS01750 (LRO84_01750)	rplS	373416..373784 (+)	369	WP_231762436.1	50S ribosomal protein L19	-
LRO84_RS01755 (LRO84_01755)	-	373838..374779 (-)	942	WP_231763342.1	lipase family alpha/beta hydrolase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 137470.86 Da
• Isoelectric Point: 7.7443

>NTDB_id=634196 LRO84_RS01720 WP_231762432.1 366660..370514(+) (pilY1) [Acinetobacter calcoaceticus strain ARu19]
MKLKLKNFKPNNLWYAICSSSVAFTWLITSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTSNSYNENRLAMLKNGMNA
FLASNNPVLNDTRVGLGNFSANGDSRSGQILVAAAPLGDASTLNTVGSQRYKLKQAVANLSAGGSTPSAHAYAEAAAYLM
GTSTYSEANYPIRKDSYIKRVRKSDNRTEYSYCTNYRDSQIDTASLWQPCRSSSYWSNWSTSNPGVATATAYDTSSDSSY
SYTYYYTTFNYAIANADSGIPKSKTNDTTSNPNIVLDRNASNLNAIYQSPLPAVANRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGANFSCSGGLSNTSSDSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKGDDACSPNQTTNAVAAPGYGNGGFFPTQSAQGVTSSVITFINNLDKVPLEPLTTGAISVPYDALNPKNLQEY
GYLRAFEPNPANTYLTWRGNLKKYHVVLSGTNAGAFEANTGGLVYNASGAFRTGTKDYWNSSNYNDGGKVFLGGSYAKVP
VPIVGQNETRDEEGNITKYYYAVQSKIRNLFTDVSAVAADGSLTKISTSGTNLLKIPAAPLEGTNPFDSVANTASYVLGK
FDASTGQDILKAFPISLKLKILNYLGYSTDIGAATLPSSLVISNEPYLSMGGSIHSLPVQLTYNGTLDENGNLTSAREQS
ILYGTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDASAPAHGMDGAWVSDPAYSITTTGSGSAAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPASPKLLFRVGVDQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDAKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQVFRIDLN
NNQTKTNSTYSSFGIRVVRLANLATNDSTYDGSNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDLTRSALRKNPQILRSGETRVAQIFFPNTGTGQGGWY
RSLSSTSGGTEKANNSFRIKGGLKAFEEPMAITGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTYCLPFGACLNSDGS
IDQNKEDPSGFQTQTGGNCPAGVSECNKNVIGSGIRSVTFVPTEDNPPATNSCGKLKLSGNEQGTGQWQCTSHLVPTRWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=634196 LRO84_RS01720 WP_231762432.1 366660..370514(+) (pilY1) [Acinetobacter calcoaceticus strain ARu19]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCGGTTGCTTTTACATGGCT
AATCACAAGCTCCGTTGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACAGCTGGTAAAAAAACGATTGTGATGA
TGTTAGATACCTCCGGGAGTATGACATCTAATAGTTATAACGAAAATCGCTTGGCTATGCTTAAAAATGGTATGAATGCT
TTTTTAGCCAGCAATAATCCTGTTTTAAATGATACTCGTGTGGGCTTAGGTAATTTCTCTGCAAATGGTGATAGTCGAAG
TGGGCAAATTTTGGTGGCTGCTGCTCCTTTAGGAGATGCAAGTACTTTAAATACGGTGGGGTCTCAGCGCTATAAATTAA
AACAGGCAGTTGCAAATTTATCTGCTGGTGGGTCAACACCTTCAGCACATGCTTATGCGGAAGCTGCTGCTTATTTGATG
GGTACATCGACTTATTCAGAGGCGAATTACCCTATTCGCAAAGATAGTTATATAAAACGTGTACGAAAATCTGATAATAG
AACAGAATATTCATATTGTACGAATTATCGCGATTCACAAATTGATACAGCAAGTTTATGGCAACCTTGTCGCTCTAGTA
GTTATTGGAGTAACTGGTCAACCTCTAATCCAGGTGTAGCCACGGCCACGGCGTATGATACTTCATCTGATTCAAGCTAT
TCTTATACTTATTACTACACCACTTTTAATTACGCTATAGCAAACGCAGATAGCGGTATTCCAAAATCAAAAACAAATGA
TACGACAAGCAATCCGAATATTGTTTTAGATAGAAATGCTTCTAACTTAAATGCCATTTACCAATCTCCTTTGCCGGCGG
TGGCCAATCGTCAGAGTTGTGATGGGCAGGGCATTTACTTTTTATCAGATGGTGAGCCGAACAATACAACAAATACACGC
TCGGCAACAGTAATGTCGACGGCCCTAGGTAGCACTCTGGGAGCAAATTTTAGTTGCTCTGGAGGACTTTCTAATACTTC
ATCAGATTCTGGTTGGGCTTGTATGGGGGAGTTTGCGAAACGACTATTTGATAAAACAAAAAACCCTGCCGGAGTTTCTA
TTCAAACAGCATTTGTTGGTTTTGGTAGTGATTTTTCTAGCTTAAGTTCTTCTGATGTAAAAAATGCCTGTCGTTTAAGT
TCGAGAACCCAATCTGACCGAAAAGGAGATGATGCGTGTTCACCGAATCAGACCACAAATGCGGTCGCTGCACCTGGTTA
TGGAAATGGAGGTTTTTTCCCTACCCAAAGTGCGCAAGGGGTAACGAGTAGTGTTATTACATTTATTAATAATTTAGATA
AAGTTCCTTTAGAGCCTTTAACAACAGGTGCAATCTCTGTTCCGTATGATGCGTTAAATCCAAAAAATTTACAGGAATAT
GGTTATTTACGTGCTTTTGAGCCTAACCCCGCCAATACGTATTTAACATGGAGAGGAAATCTAAAGAAATATCATGTTGT
TTTATCGGGAACAAATGCTGGGGCTTTTGAGGCTAATACAGGGGGATTAGTCTACAACGCAAGTGGAGCATTTAGAACGG
GTACGAAGGATTACTGGAATAGTTCTAATTATAACGATGGGGGTAAAGTCTTTTTAGGTGGTTCATATGCAAAAGTTCCT
GTACCAATTGTGGGGCAAAATGAAACACGTGATGAAGAAGGAAATATCACAAAATATTATTACGCAGTACAAAGTAAAAT
CCGCAACTTATTTACTGATGTTTCCGCCGTTGCAGCGGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTGC
TAAAAATTCCCGCTGCTCCACTAGAAGGAACTAATCCTTTTGATAGTGTTGCTAATACAGCAAGTTATGTTTTAGGAAAA
TTTGATGCCTCAACTGGACAAGATATTTTAAAAGCTTTCCCGATTAGCTTGAAATTGAAAATATTAAATTATCTAGGTTA
TTCAACTGATATTGGTGCGGCCACTTTACCTTCCTCCTTGGTTATATCGAATGAACCATATTTATCTATGGGCGGCAGTA
TTCACTCTTTACCAGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGAATTTAACTTCTGCTCGAGAGCAATCC
ATTCTCTATGGAACGATGGAAGGCGGTTTACATATTGTGGATGCTTCAACTGGTGTGGAACAAATGGCTTTCGTTCCTGC
CGATATATTAAATGATCCCGTTGCATCAAAAGCTTTAGTTGTTGGCCAAAGTGATGCCTCAGCTCCTGCTCACGGTATGG
ATGGGGCTTGGGTATCTGACCCTGCATATAGTATTACTACCACAGGAAGTGGTAGTGCTGCAGTTTCAAAAGTGACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGTGGCAGCAGTTATTATGGCTTAAATGTCTTAAATCCTGCTTCGCC
TAAGCTTCTCTTTAGAGTCGGAGTAGACCAAACTGATTATAGTCGTATGGGGCAGAGTTGGTCTAAACCTGTACTGGCAA
ATATTCGTTATAACGGGGTTATTAAACGGGTCATGATTGTTGGTGGTGGCTACGACCAATGTTATGAAAACCCAAATATT
ACCTTGAGCAACTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGCTAAAACTGGGGAACG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGTATTAGTACTT
TAGATCGAGATGCTGATGGTTTAGTAGACCATTTATATTTCGGTGATTTAGGCGGACAAGTCTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACGAATTCGACTTATAGTAGTTTTGGTATTCGAGTTGTTCGATTAGCCAATTTAGCAACGAATGA
TTCCACTTATGATGGCTCGAACGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCAACAGTGACAATTCATG
ATTATGGAATTCGCACTTTTATTACTGTAGGTATTGCTTCAGGTGACCGTAGTACCCCATTGGATGTTTATCCGCTTACA
GGTCGTGAGGGGATGTCACCTAGCACGGCATTAAGCGGAAGACCTGTAAACAACGTCTATGGAATTATCGACAAAGACTT
TATTAAAAAGAATTTAATGTCTTTAACTGATAGCCAGCTTGAAACGAAAGATCTTACTCGATCGGCTCTTAGAAAAAATC
CACAAATTTTACGATCTGGAGAAACACGAGTAGCACAAATTTTCTTTCCAAATACAGGGACGGGCCAAGGTGGTTGGTAT
CGCTCACTTTCTAGTACGAGCGGTGGTACAGAGAAAGCCAATAATAGTTTCCGTATTAAAGGTGGACTAAAAGCTTTTGA
AGAGCCAATGGCAATTACTGGGACTTTAATTGTGCCTGTTTATGACCCGCAGGGAACAGGCATTGTGGCGGCAGACCCAT
GTTTACCACGTGTGGTAGGTGAAACGGATCAGCAGACTTACTGTTTACCATTTGGAGCCTGTCTTAATTCTGATGGATCC
ATTGATCAGAATAAAGAAGATCCTAGCGGGTTTCAAACACAAACAGGTGGTAACTGCCCAGCAGGAGTTTCTGAATGTAA
TAAAAACGTCATTGGCTCAGGTATTCGTAGCGTAACATTTGTACCAACGGAGGATAACCCACCTGCGACTAATAGTTGTG
GGAAATTAAAGCTGTCTGGTAATGAGCAAGGGACTGGACAGTGGCAATGTACGAGTCATTTAGTTCCTACGCGTTGGTAT
GAGCGTTATCGTTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (713-964)

• von Willebrand factor type A domain (VWA_2) (51-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	84.895	100	0.854