Detailed information NTG0063288

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: T15_RS00785
• Genome accession: NC_022665
• Coordinates: 116930..117364 (+)
• Length: 144 a.a.
• NCBI ID: WP_023369086.1
• Uniprot ID: -
• Organism: Streptococcus suis T15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111930..122364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
T15_RS00750 (T15_0115)	-	112672..113037 (+)	366	WP_023369079.1	DUF1033 family protein	-
T15_RS00755 (T15_0116)	-	113072..114022 (-)	951	WP_023369081.1	S66 peptidase family protein	-
T15_RS00760 (T15_0117)	comYA	114108..115058 (+)	951	WP_023369082.1	competence type IV pilus ATPase ComGA	Machinery gene
T15_RS00765 (T15_0118)	comYB	114970..116007 (+)	1038	WP_256786938.1	competence type IV pilus assembly protein ComGB	Machinery gene
T15_RS00770 (T15_0119)	comYC	116009..116290 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
T15_RS00775 (T15_0120)	comGD	116271..116678 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
T15_RS00780 (T15_0121)	comYE	116650..116943 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
T15_RS00785 (T15_0122)	comGF/cglF	116930..117364 (+)	435	WP_023369086.1	competence type IV pilus minor pilin ComGF	Machinery gene
T15_RS00790 (T15_0123)	comGG	117342..117752 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
T15_RS00795 (T15_0124)	comYH	117809..118762 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
T15_RS00800 (T15_0125)	-	118812..119999 (+)	1188	WP_023369088.1	acetate kinase	-
T15_RS00805 (T15_0126)	-	120314..120865 (+)	552	WP_023369090.1	folate family ECF transporter S component	-
T15_RS00810 (T15_0127)	-	120921..122177 (+)	1257	WP_023369092.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16481.81 Da
• Isoelectric Point: 5.9234

>NTDB_id=63288 T15_RS00785 WP_023369086.1 116930..117364(+) (comGF/cglF) [Streptococcus suis T15]
MLKSKISAFTLLECLVVLVILSGSLLIFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVNKGE
QALAFGKSWSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=63288 T15_RS00785 WP_023369086.1 116930..117364(+) (comGF/cglF) [Streptococcus suis T15]
TTGTTAAAAAGTAAAATTTCTGCTTTTACACTCTTGGAATGTTTGGTGGTTCTAGTCATTCTGTCAGGTAGCCTCTTGAT
TTTTGAAGGCTTATCCAAATTACTAGTCCAGGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCAACAAAGGTGAA
CAGGCTTTGGCCTTTGGCAAGTCATGGTCGGATGATTTTCGGAAAACAAATGATAGAGGCCAGGGTTACCAACCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GAACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae Rx1	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae D39	52.482	97.917	0.514
comGF/cglF	Streptococcus pneumoniae R6	52.482	97.917	0.514
comGF/cglF	Streptococcus mitis NCTC 12261	52.985	93.056	0.493
comYF	Streptococcus mutans UA140	48.611	100	0.486
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF/cglF	Streptococcus mitis SK321	50	93.056	0.465
comGF	Lactococcus lactis subsp. cremoris KW2	45.39	97.917	0.444