Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   F6Y13_RS00940 Genome accession   NZ_AP020311
Coordinates   148500..149240 (+) Length   246 a.a.
NCBI ID   WP_000216878.1    Uniprot ID   A0A0H2XJD3
Organism   Staphylococcus aureus strain KUH140013     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 143500..154240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6Y13_RS00910 (KUH140013_0161) yhaM 143918..144859 (+) 942 WP_150029176.1 3'-5' exoribonuclease YhaM -
  F6Y13_RS00915 (KUH140013_0162) - 144980..145942 (-) 963 WP_000782121.1 foldase protein PrsA -
  F6Y13_RS00920 (KUH140013_0163) - 146147..146704 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  F6Y13_RS00930 (KUH140013_0164) - 147437..147802 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  F6Y13_RS00935 (KUH140013_0165) - 147944..148366 (-) 423 WP_000004981.1 HIT family protein -
  F6Y13_RS00940 (KUH140013_0166) pptA 148500..149240 (+) 741 WP_000216878.1 ABC transporter ATP-binding protein EcsA Regulator
  F6Y13_RS00945 (KUH140013_0167) ecsB 149233..150456 (+) 1224 WP_001245769.1 ABC transporter permease EcsB -
  F6Y13_RS00950 (KUH140013_0168) traP 150580..151083 (-) 504 WP_000737976.1 signal transduction protein TRAP -
  F6Y13_RS00955 - 151246..151356 (+) 111 WP_001790154.1 hypothetical protein -
  F6Y13_RS00960 (KUH140013_0169) hemE 151346..152383 (+) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  F6Y13_RS00965 (KUH140013_0170) hemH 152441..153364 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27717.04 Da        Isoelectric Point: 4.6672

>NTDB_id=63277 F6Y13_RS00940 WP_000216878.1 148500..149240(+) (pptA) [Staphylococcus aureus strain KUH140013]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDETMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=63277 F6Y13_RS00940 WP_000216878.1 148500..149240(+) (pptA) [Staphylococcus aureus strain KUH140013]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAACGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAGTTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XJD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545

Multiple sequence alignment