Detailed information NTG0632292

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LQF05_RS07540
• Genome accession: NZ_CP088004
• Coordinates: 1635487..1637712 (+)
• Length: 741 a.a.
• NCBI ID: WP_270067649.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SB-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1630487..1642712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQF05_RS07510 (LQF05_07495)	-	1630637..1630945 (-)	309	WP_011913753.1	hypothetical protein	-
LQF05_RS07515 (LQF05_07500)	-	1630949..1631584 (-)	636	WP_084904569.1	PilZ domain-containing protein	-
LQF05_RS07520 (LQF05_07505)	-	1631617..1632864 (+)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
LQF05_RS07525 (LQF05_07510)	lolD	1632872..1633570 (+)	699	WP_270067837.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LQF05_RS07530 (LQF05_07515)	-	1633570..1634814 (+)	1245	WP_045632531.1	lipoprotein-releasing ABC transporter permease subunit	-
LQF05_RS07535 (LQF05_07520)	-	1634827..1635342 (-)	516	WP_011913748.1	DUF2062 domain-containing protein	-
LQF05_RS07540 (LQF05_07525)	comA	1635487..1637712 (+)	2226	WP_270067649.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LQF05_RS07545 (LQF05_07530)	-	1637784..1638416 (+)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
LQF05_RS07550 (LQF05_07535)	-	1638413..1638841 (+)	429	WP_013983259.1	ExbD/TolR family protein	-
LQF05_RS07555 (LQF05_07540)	lpxK	1638841..1639845 (+)	1005	WP_270067650.1	tetraacyldisaccharide 4'-kinase	-
LQF05_RS07560 (LQF05_07545)	-	1639891..1640076 (+)	186	WP_011913743.1	Trm112 family protein	-
LQF05_RS07565 (LQF05_07550)	kdsB	1640073..1640837 (+)	765	WP_270067651.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LQF05_RS07570 (LQF05_07555)	-	1640839..1641306 (+)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
LQF05_RS07575 (LQF05_07560)	murB	1641303..1642322 (+)	1020	WP_221292202.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81034.67 Da
• Isoelectric Point: 9.4710

>NTDB_id=632292 LQF05_RS07540 WP_270067649.1 1635487..1637712(+) (comA) [Stutzerimonas stutzeri strain SB-1]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPCLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTAIDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPCACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRSQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGWAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQHSCVLQIEANGERILLTGDIDQA
AEQAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLETLDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=632292 LQF05_RS07540 WP_270067649.1 1635487..1637712(+) (comA) [Stutzerimonas stutzeri strain SB-1]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGCCTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGTGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGTTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCAGGCGAGCGCCTGACGGCGTCGACGGCAATCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCATGGCCGCGGCGGTTGCCCTGGTTGCCCTGTGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCACCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCCGGCTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGTCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGGTGCCAGACGGCTGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCACTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCTTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGACGCTCGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATC
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.527	96.356	0.641
comA	Ralstonia pseudosolanacearum GMI1000	36.504	100	0.383