Detailed information NTG0631893

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LP093_RS10930
• Genome accession: NZ_CP087859
• Coordinates: 2148910..2149968 (-)
• Length: 352 a.a.
• NCBI ID: WP_112741888.1
• Uniprot ID: -
• Organism: Moraxella bovis strain SAM57983
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	2146666..2156367	2148910..2149968	within	0

Gene organization within MGE regions

Location: 2146666..2156367

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP093_RS10915 (LP093_10815)	-	2146666..2147196 (-)	531	WP_228157777.1	pilus assembly protein PilP	-
LP093_RS10920 (LP093_10820)	-	2147193..2148035 (-)	843	WP_078273208.1	type 4a pilus biogenesis protein PilO	-
LP093_RS10925 (LP093_10825)	-	2148032..2148910 (-)	879	WP_078273209.1	PilN domain-containing protein	-
LP093_RS10930 (LP093_10830)	comM	2148910..2149968 (-)	1059	WP_112741888.1	pilus assembly protein PilM	Machinery gene
LP093_RS10935 (LP093_10835)	-	2150236..2152944 (+)	2709	WP_112741887.1	penicillin-binding protein 1A	-
LP093_RS10940 (LP093_10840)	glmU	2153285..2154640 (-)	1356	WP_112741886.1	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	-
LP093_RS10945 (LP093_10845)	-	2154879..2155346 (-)	468	WP_112741885.1	hypothetical protein	-
LP093_RS10950 (LP093_10850)	-	2155852..2156367 (-)	516	WP_112741883.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38370.49 Da
• Isoelectric Point: 4.7425

>NTDB_id=631893 LP093_RS10930 WP_112741888.1 2148910..2149968(-) (comM) [Moraxella bovis strain SAM57983]
MGLSFSSKGRHLLGLDVSTTSVKLVELTKQQGRLHLKSYGVEPLEPGWVVDKNIVNGEEVGEAIARLVRRSGAGAKDAAT
AVSGSAVITKIIDMETNMSDSDREAQIKLDAEQYIPYPLAEVNMDFEVLGPSTTNPNLVRVLLAASRSENVDQRVETLLM
GGLTAKVMDIESHAIERAFSLMVDNLPNDPQVVALIDLGHKQSTLYIAKDGEFIYNREQGFGGAQLTEEIQSRYSIPYHD
ATIGKHEHTLPADYHESVLTPFMENIVQQISRSLQFYFSSSEYNNVDHIILCGGTSALPGLAQMVQQRVGGMVSVANPFE
GMSIDSRIDTVTLQKDAPSLMAACGLALRGFD

Nucleotide

• Length: 1059 bp

>NTDB_id=631893 LP093_RS10930 WP_112741888.1 2148910..2149968(-) (comM) [Moraxella bovis strain SAM57983]
GTGGGACTATCTTTTTCTTCTAAGGGTCGGCATCTTCTCGGCTTAGATGTCAGTACCACTTCCGTTAAACTTGTTGAGCT
AACAAAACAACAAGGAAGACTTCATTTGAAGTCTTATGGCGTTGAGCCGCTTGAGCCGGGTTGGGTTGTTGACAAAAATA
TTGTCAATGGTGAAGAAGTGGGCGAGGCCATCGCTCGTTTGGTACGTCGTTCTGGTGCTGGTGCTAAAGACGCAGCAACG
GCAGTATCAGGCTCGGCGGTGATTACCAAAATTATTGACATGGAAACAAACATGTCTGATTCTGACCGCGAGGCCCAAAT
CAAGCTGGATGCTGAGCAGTATATCCCATATCCATTGGCGGAAGTGAATATGGATTTTGAGGTGTTAGGACCATCAACGA
CTAACCCGAACTTGGTGCGAGTTCTGCTTGCTGCTTCTCGTTCTGAGAACGTGGATCAGCGTGTCGAGACTCTCTTGATG
GGTGGTTTGACAGCCAAAGTGATGGATATTGAGTCTCATGCCATTGAGCGTGCATTTAGTTTGATGGTGGATAATCTGCC
TAATGACCCACAGGTGGTAGCACTCATTGATTTGGGACATAAGCAGTCTACACTGTATATCGCCAAAGATGGTGAATTTA
TCTATAACCGTGAGCAAGGTTTTGGTGGGGCTCAGTTAACTGAAGAGATTCAGTCGCGTTACAGTATTCCTTATCATGAT
GCTACCATCGGTAAGCATGAACATACACTGCCTGCTGATTATCATGAGAGCGTGCTCACACCTTTTATGGAAAATATCGT
CCAACAAATCAGCCGTTCATTGCAATTTTATTTCTCATCTAGCGAATACAACAATGTTGACCATATTATCTTATGTGGTG
GCACTTCTGCGCTGCCAGGACTGGCTCAAATGGTGCAACAACGTGTCGGGGGTATGGTATCAGTAGCAAATCCTTTTGAG
GGTATGTCTATTGACTCACGCATTGATACCGTTACGCTCCAAAAAGATGCACCAAGCCTGATGGCGGCATGTGGATTGGC
TTTAAGGGGGTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	49.138	98.864	0.486
pilM	Acinetobacter baumannii D1279779	48.851	98.864	0.483
comM	Acinetobacter baylyi ADP1	47.701	98.864	0.472
pilM	Legionella pneumophila strain ERS1305867	39.42	98.011	0.386