Detailed information NTG0631539

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LP119_RS03090
• Genome accession: NZ_CP087805
• Coordinates: 592793..593851 (+)
• Length: 352 a.a.
• NCBI ID: WP_112741888.1
• Uniprot ID: -
• Organism: Moraxella bovis strain SAM57942
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 587793..598851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP119_RS03080 (LP119_03060)	glmU	588121..589476 (+)	1356	WP_264683693.1	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	-
LP119_RS03085 (LP119_03065)	-	589817..592525 (-)	2709	WP_264683692.1	transglycosylase domain-containing protein	-
LP119_RS03090 (LP119_03070)	comM	592793..593851 (+)	1059	WP_112741888.1	pilus assembly protein PilM	Machinery gene
LP119_RS03095 (LP119_03075)	-	593851..594732 (+)	882	WP_264677904.1	PilN domain-containing protein	-
LP119_RS03100 (LP119_03080)	pilO	594729..595571 (+)	843	WP_078273208.1	type 4a pilus biogenesis protein PilO	-
LP119_RS03105 (LP119_03085)	-	595568..596098 (+)	531	WP_228157777.1	pilus assembly protein PilP	-
LP119_RS03110 (LP119_03090)	-	596133..596519 (+)	387	WP_264697698.1	AMIN domain-containing protein	-
LP119_RS12980	-	596557..596925 (+)	369	WP_272506256.1	IS630 transposase-related protein	-
LP119_RS12985	-	596964..597464 (+)	501	WP_272506410.1	transposase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38370.49 Da
• Isoelectric Point: 4.7425

>NTDB_id=631539 LP119_RS03090 WP_112741888.1 592793..593851(+) (comM) [Moraxella bovis strain SAM57942]
MGLSFSSKGRHLLGLDVSTTSVKLVELTKQQGRLHLKSYGVEPLEPGWVVDKNIVNGEEVGEAIARLVRRSGAGAKDAAT
AVSGSAVITKIIDMETNMSDSDREAQIKLDAEQYIPYPLAEVNMDFEVLGPSTTNPNLVRVLLAASRSENVDQRVETLLM
GGLTAKVMDIESHAIERAFSLMVDNLPNDPQVVALIDLGHKQSTLYIAKDGEFIYNREQGFGGAQLTEEIQSRYSIPYHD
ATIGKHEHTLPADYHESVLTPFMENIVQQISRSLQFYFSSSEYNNVDHIILCGGTSALPGLAQMVQQRVGGMVSVANPFE
GMSIDSRIDTVTLQKDAPSLMAACGLALRGFD

Nucleotide

• Length: 1059 bp

>NTDB_id=631539 LP119_RS03090 WP_112741888.1 592793..593851(+) (comM) [Moraxella bovis strain SAM57942]
GTGGGACTATCTTTTTCTTCTAAGGGTCGGCATCTTCTCGGCTTAGATGTCAGTACCACTTCCGTTAAACTTGTTGAGCT
AACAAAACAACAAGGAAGACTTCATTTGAAGTCTTATGGCGTTGAGCCGCTTGAGCCGGGTTGGGTTGTTGACAAAAATA
TTGTCAATGGTGAAGAAGTGGGCGAGGCCATCGCTCGTTTGGTACGTCGTTCTGGTGCTGGTGCTAAAGACGCAGCAACG
GCAGTATCAGGCTCGGCGGTGATTACCAAAATTATTGACATGGAAACAAACATGTCTGATTCTGACCGCGAGGCCCAAAT
CAAGCTGGATGCTGAGCAGTATATCCCATATCCATTGGCGGAAGTGAATATGGATTTTGAGGTGTTAGGACCATCAACGA
CTAACCCGAACTTGGTGCGAGTTCTGCTTGCTGCTTCTCGTTCTGAGAACGTGGATCAGCGTGTCGAGACTCTCTTGATG
GGTGGTTTGACAGCCAAAGTGATGGATATTGAGTCTCATGCCATTGAGCGTGCATTTAGTTTGATGGTGGATAATCTGCC
TAATGACCCACAGGTGGTAGCACTCATTGATTTGGGACATAAGCAGTCTACACTGTATATCGCCAAAGATGGTGAATTTA
TCTATAACCGTGAGCAAGGTTTTGGTGGGGCTCAGTTAACTGAAGAGATTCAGTCGCGTTACAGTATTCCTTATCATGAT
GCTACCATCGGTAAGCATGAACATACACTGCCTGCTGATTATCATGAGAGCGTGCTCACACCTTTTATGGAAAATATCGT
CCAACAAATCAGCCGTTCATTGCAATTTTATTTCTCATCTAGCGAATACAACAATGTTGACCATATTATCTTATGTGGTG
GCACTTCTGCGCTGCCAGGACTGGCTCAAATGGTGCAACAACGTGTCGGGGGTATGGTATCAGTAGCAAATCCTTTTGAG
GGTATGTCTATTGACTCACGCATTGATACCGTTACGCTCCAAAAAGATGCACCAAGCCTGATGGCGGCATGTGGATTGGC
TTTAAGGGGGTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	49.138	98.864	0.486
pilM	Acinetobacter baumannii D1279779	48.851	98.864	0.483
comM	Acinetobacter baylyi ADP1	47.701	98.864	0.472
pilM	Legionella pneumophila strain ERS1305867	39.42	98.011	0.386