Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAZ172_RS08275 | Genome accession | NC_022604 |
| Coordinates | 1669398..1669697 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus subsp. aureus Z172 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1664398..1674697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAZ172_RS08250 (SAZ172_1550) | gcvPA | 1665610..1666956 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAZ172_RS08255 (SAZ172_1551) | gcvT | 1666976..1668067 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAZ172_RS08260 (SAZ172_1552) | - | 1668226..1668750 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| SAZ172_RS08265 | - | 1668740..1668886 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAZ172_RS08270 (SAZ172_1553) | comGF | 1668983..1669480 (-) | 498 | WP_001803317.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAZ172_RS08275 (SAZ172_1554) | comGE | 1669398..1669697 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAZ172_RS08280 (SAZ172_1555) | comGD | 1669684..1670130 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAZ172_RS08285 (SAZ172_1556) | comGC | 1670108..1670419 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAZ172_RS08290 (SAZ172_1557) | comGB | 1670433..1671503 (-) | 1071 | WP_000775706.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAZ172_RS08295 (SAZ172_1558) | comGA | 1671475..1672449 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAZ172_RS08300 (SAZ172_1559) | - | 1672501..1673124 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAZ172_RS08305 (SAZ172_1560) | - | 1673121..1673450 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAZ172_RS08310 (SAZ172_1561) | - | 1673450..1674436 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SAZ172_RS08315 | - | 1674433..1674636 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=63048 SAZ172_RS08275 WP_000844413.1 1669398..1669697(-) (comGE) [Staphylococcus aureus subsp. aureus Z172]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=63048 SAZ172_RS08275 WP_000844413.1 1669398..1669697(-) (comGE) [Staphylococcus aureus subsp. aureus Z172]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |