Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   N596_RS04340 Genome accession   NC_022584
Coordinates   898424..899428 (-) Length   334 a.a.
NCBI ID   WP_006595886.1    Uniprot ID   A0A127TTE3
Organism   Streptococcus ilei     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 893424..904428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N596_RS04325 (N596_04465) thrS 893677..895620 (-) 1944 WP_023027099.1 threonine--tRNA ligase -
  N596_RS10415 - 895653..895842 (-) 190 Protein_858 hypothetical protein -
  N596_RS04330 (N596_04470) - 896006..897328 (-) 1323 WP_023027100.1 glycosyltransferase family 4 protein -
  N596_RS04335 (N596_04475) - 897330..898328 (-) 999 WP_042361181.1 glycosyltransferase family 4 protein -
  N596_RS04340 (N596_04480) ccpA 898424..899428 (-) 1005 WP_006595886.1 catabolite control protein A Regulator
  N596_RS04345 (N596_04485) - 899589..900671 (+) 1083 WP_023023931.1 Xaa-Pro peptidase family protein -
  N596_RS04350 (N596_04490) - 900696..901034 (+) 339 WP_023023933.1 cytochrome o ubiquinol oxidase -
  N596_RS04355 (N596_04495) - 901132..901581 (-) 450 WP_023023935.1 Rrf2 family transcriptional regulator -
  N596_RS04360 (N596_04500) - 901725..902567 (-) 843 WP_023027102.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37005.12 Da        Isoelectric Point: 6.6646

>NTDB_id=62954 N596_RS04340 WP_006595886.1 898424..899428(-) (ccpA) [Streptococcus ilei]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVNVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=62954 N596_RS04340 WP_006595886.1 898424..899428(-) (ccpA) [Streptococcus ilei]
ATGAATACAGACGATACTGTAACCATTTACGACGTTGCCCGAGAGGCGGGTGTCTCAATGGCGACTGTTAGCCGTGTCGT
GAACGGAAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CAGTAGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACCAATAGTTATTTCTCT
ACTCTGGCAAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAACATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAATACTCTTTTCTCAAAACAGGTCGATGGGATTATCTTCATGGGTTATCACTTGACAGAAA
AGATTCGTTCAGAATTCTCTCGTTCTCGGACACCGGTGGTCCTTGCTGGGACAGTTGATGTCGAACATCAATTGCCAAGT
GTCAATATCGATTACAAGCAAGCGACAGTAGACGCGGTTACACTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTAGATGATATCAACGGTAAGATTCGCTTGGCTGGCTACAAAGATGCTTTGAAAGCAAAAAAATTGTCTT
ACAGTGAAGGCTTGGTCTTTGAGTCTAAGTACCGCTATGAAGAAGGCTATAACTTGGCTGAACGCATCATTGCATCTAAA
GCAACAGCAGCCTTTGTAACTGGGGATGAATTGGCAGCAGGTTTGCTTAATGGTCTAGCTGATCAAGGTGTGAACGTACC
GGAAGATTTTGAGTTGATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAATCTTTCAACTGTTGGCCAAC
CACTTTATGATTTGGGGGCTATCAGTATGCGGATGCTGACAAAAATTATGCATAAGGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGGACTACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127TTE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566

Multiple sequence alignment