Detailed information NTG0629078

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LO008_RS18140
• Genome accession: NZ_CP087351
• Coordinates: 3739266..3740396 (-)
• Length: 376 a.a.
• NCBI ID: WP_001991425.1
• Uniprot ID: A0A0J1A8J0
• Organism: Acinetobacter baumannii strain DB003
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3734266..3745396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO008_RS18115	-	3734441..3735205 (-)	765	WP_000786955.1	AraC family transcriptional regulator	-
LO008_RS18120	-	3735227..3736441 (-)	1215	WP_000372838.1	MFS transporter	-
LO008_RS18125	-	3736578..3737228 (+)	651	WP_012300783.1	TetR/AcrR family transcriptional regulator	-
LO008_RS18130	-	3737334..3738254 (+)	921	WP_001994180.1	DMT family transporter	-
LO008_RS18135	-	3738646..3739215 (-)	570	WP_000633612.1	L-threonylcarbamoyladenylate synthase	-
LO008_RS18140	dprA	3739266..3740396 (-)	1131	WP_001991425.1	DNA-processing protein DprA	Machinery gene
LO008_RS18145	tsaP	3740417..3741571 (-)	1155	WP_000755285.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
LO008_RS18150	def	3741694..3742224 (+)	531	WP_001196539.1	peptide deformylase	-
LO008_RS18155	-	3742261..3742689 (+)	429	WP_000231981.1	DUF2946 family protein	-
LO008_RS18160	-	3742762..3744876 (+)	2115	WP_001120675.1	TonB-dependent copper receptor	-
LO008_RS18165	-	3744930..3745136 (+)	207	WP_000182542.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 41843.48 Da
• Isoelectric Point: 6.7530

>NTDB_id=629078 LO008_RS18140 WP_001991425.1 3739266..3740396(-) (dprA) [Acinetobacter baumannii strain DB003]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQKQTKEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVIHHNVPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide

• Length: 1131 bp

>NTDB_id=629078 LO008_RS18140 WP_001991425.1 3739266..3740396(-) (dprA) [Acinetobacter baumannii strain DB003]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGACTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGTGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGTCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAATGGCGCCATTATTACGGAGTTTTTACCGGGTACAC
CACCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCAGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAAACAAACTAAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGATCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAATTCATCATAATGTGCC
GGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (87-285)

3D structure

• AlphaFold DB: A0A0J1A8J0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Acinetobacter baumannii D1279779	97.34	100	0.973
dprA	Acinetobacter baumannii strain A118	97.074	100	0.971
dprA	Acinetobacter baylyi ADP1	70.942	100	0.721
dprA	Vibrio cholerae strain A1552	43.243	88.564	0.383