Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | N597_RS00270 | Genome accession | NC_022582 |
| Coordinates | 50510..51463 (+) | Length | 317 a.a. |
| NCBI ID | WP_023022079.1 | Uniprot ID | - |
| Organism | Streptococcus ilei | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 45510..56463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N597_RS00230 (N597_00240) | - | 46275..46652 (+) | 378 | WP_006595139.1 | DUF1033 family protein | - |
| N597_RS00235 (N597_00245) | comYA | 46758..47699 (+) | 942 | WP_006597118.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| N597_RS00240 (N597_00250) | comYB | 47641..48663 (+) | 1023 | WP_023022075.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| N597_RS00245 (N597_00255) | comYC | 48660..48977 (+) | 318 | WP_023022076.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| N597_RS00250 (N597_00260) | comGD/cglD | 48946..49371 (+) | 426 | WP_042507426.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| N597_RS00255 (N597_00265) | comGE | 49337..49630 (+) | 294 | WP_006595134.1 | competence type IV pilus minor pilin ComGE | - |
| N597_RS00260 (N597_00270) | comGF/cglF | 49614..50066 (+) | 453 | WP_040803180.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| N597_RS00265 (N597_00275) | comGG | 50032..50478 (+) | 447 | WP_006595132.1 | competence type IV pilus minor pilin ComGG | - |
| N597_RS00270 (N597_00280) | comYH | 50510..51463 (+) | 954 | WP_023022079.1 | class I SAM-dependent methyltransferase | Machinery gene |
| N597_RS00275 (N597_00285) | - | 51512..52708 (+) | 1197 | WP_023022080.1 | acetate kinase | - |
| N597_RS00280 (N597_00290) | - | 52860..53534 (+) | 675 | WP_224781595.1 | CPBP family intramembrane glutamic endopeptidase | - |
| N597_RS00285 (N597_00295) | folP | 53694..54650 (+) | 957 | WP_023022082.1 | dihydropteroate synthase | - |
| N597_RS00290 (N597_00300) | - | 54667..55971 (+) | 1305 | WP_006595127.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36075.86 Da Isoelectric Point: 4.2657
>NTDB_id=62878 N597_RS00270 WP_023022079.1 50510..51463(+) (comYH) [Streptococcus ilei]
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKQWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
MNFEKIEKAYGYLLENTQTIQNDLQTNFYDALVEQNAIYLDGQTELTLVKENNQRLKDLNLNKEEWRRSFQYLLMKAAQT
EPLQANHQFTPDGIGFLLVFLVDQLASSDQVDVLEMGSGTGNLAQTLMNNCQRSLDYLGLEIDDLLIDLAASMAEVMKAD
VNFAQGDAIRPQVLKESDVIISDLPVGYYPDDAIASRYQVASPQGHTYAHHLLIEQSLKYLKPGGVAIFLAPNDLLTSEQ
SPLLKQWMQDHAQVLAMVTLPENLFRSANLAKTIFVFRKQEEAVVQPFVYPLTDLQDQEDLMKFRESFQNWNKESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=62878 N597_RS00270 WP_023022079.1 50510..51463(+) (comYH) [Streptococcus ilei]
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTGCAGACCAA
CTTTTATGATGCTCTAGTTGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCGAG
TTCCGATCAAGTAGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGCGAGCAG
AGTCCTCTGCTGAAACAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
ATGAATTTCGAAAAAATTGAGAAAGCCTACGGCTACCTATTAGAGAATACCCAAACTATCCAAAATGATTTGCAGACCAA
CTTTTATGATGCTCTAGTTGAGCAGAATGCCATCTATCTGGATGGGCAAACAGAGTTGACTCTAGTGAAGGAAAACAACC
AGCGCCTGAAGGACTTGAACTTAAACAAGGAAGAGTGGCGTCGTTCCTTCCAGTATCTTTTGATGAAGGCTGCCCAAACA
GAGCCCCTACAGGCCAATCACCAATTTACGCCAGATGGGATTGGATTTCTTCTGGTCTTCCTAGTGGATCAGTTGGCGAG
TTCCGATCAAGTAGATGTGCTAGAAATGGGGAGTGGAACAGGGAACTTGGCCCAAACCTTGATGAACAACTGTCAGCGTT
CCTTAGATTATTTGGGCTTGGAAATTGATGATCTCTTGATTGACCTTGCGGCTAGTATGGCAGAAGTGATGAAGGCGGAT
GTGAATTTTGCCCAAGGTGATGCCATTCGTCCACAAGTTTTGAAAGAGAGCGATGTGATTATCAGCGATTTACCTGTCGG
TTATTATCCAGATGATGCCATTGCGAGTCGTTACCAGGTCGCTTCCCCTCAGGGCCACACCTATGCCCATCATTTATTGA
TTGAACAATCGCTAAAATACTTAAAACCAGGTGGCGTCGCTATTTTTCTAGCTCCGAATGATCTCTTGACGAGCGAGCAG
AGTCCTCTGCTGAAACAATGGATGCAGGATCATGCTCAGGTCTTGGCCATGGTGACCTTGCCAGAGAACCTCTTTCGATC
AGCCAATCTAGCAAAAACCATCTTTGTTTTCCGCAAGCAAGAAGAAGCGGTGGTCCAACCATTTGTCTATCCTTTGACTG
ATTTGCAAGACCAGGAAGACCTCATGAAATTCCGTGAAAGTTTTCAAAACTGGAATAAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
58.73 |
99.369 |
0.584 |
| comYH | Streptococcus mutans UA159 |
58.413 |
99.369 |
0.58 |