Detailed information NTG0627019

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: N1207_RS15205
• Genome accession: NZ_CP104097
• Coordinates: 2870508..2871113 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain GL-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2865508..2876113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1207_RS15175 (N1207_15175)	-	2866321..2866710 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
N1207_RS15180 (N1207_15180)	yajC	2866767..2867033 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
N1207_RS15185 (N1207_15185)	tgt	2867070..2868215 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
N1207_RS15190 (N1207_15190)	queA	2868242..2869270 (-)	1029	WP_041850173.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
N1207_RS15195 (N1207_15195)	yrzS	2869300..2869500 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
N1207_RS15200 (N1207_15200)	ruvB	2869493..2870497 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
N1207_RS15205 (N1207_15205)	ruvA	2870508..2871113 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
N1207_RS15210 (N1207_15210)	bofC	2871252..2871764 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
N1207_RS15215 (N1207_15215)	csbX	2871812..2873119 (-)	1308	WP_015483512.1	MFS transporter	-
N1207_RS15220 (N1207_15220)	iolG	2873190..2874215 (-)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
N1207_RS15225 (N1207_15225)	yrzF	2874453..2875100 (+)	648	WP_003246159.1	phosphotransferase	-
N1207_RS15230 (N1207_15230)	-	2875146..2875268 (-)	123	WP_003229707.1	hypothetical protein	-
N1207_RS15235 (N1207_15235)	-	2875431..2875799 (+)	369	WP_172655417.1	DUF5412 family protein	-
N1207_RS15240 (N1207_15240)	-	2875806..2875946 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=627019 N1207_RS15205 WP_003229717.1 2870508..2871113(-) (ruvA) [Bacillus subtilis strain GL-4]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=627019 N1207_RS15205 WP_003229717.1 2870508..2871113(-) (ruvA) [Bacillus subtilis strain GL-4]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATAATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408