Detailed information NTG0626282

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: N0B18_RS14330
• Genome accession: NZ_CP103995
• Coordinates: 2641280..2641885 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain SRCM117109
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2636280..2646885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0B18_RS14300 (N0B18_14300)	-	2637093..2637482 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
N0B18_RS14305 (N0B18_14305)	yajC	2637539..2637805 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
N0B18_RS14310 (N0B18_14310)	tgt	2637842..2638987 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
N0B18_RS14315 (N0B18_14315)	queA	2639014..2640042 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
N0B18_RS14320 (N0B18_14320)	yrzS	2640072..2640272 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
N0B18_RS14325 (N0B18_14325)	ruvB	2640265..2641269 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
N0B18_RS14330 (N0B18_14330)	ruvA	2641280..2641885 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
N0B18_RS14335 (N0B18_14335)	bofC	2642024..2642536 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
N0B18_RS14340 (N0B18_14340)	csbX	2642584..2643891 (-)	1308	WP_014480439.1	MFS transporter	-
N0B18_RS14345 (N0B18_14345)	iolG	2643962..2644987 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
N0B18_RS14350 (N0B18_14350)	yrzF	2645225..2645872 (+)	648	WP_014480441.1	phosphotransferase	-
N0B18_RS14355 (N0B18_14355)	-	2645918..2646040 (-)	123	WP_003229707.1	hypothetical protein	-
N0B18_RS14365 (N0B18_14365)	-	2646245..2646571 (+)	327	WP_180995355.1	DUF5412 family protein	-
N0B18_RS14370 (N0B18_14370)	-	2646578..2646718 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=626282 N0B18_RS14330 WP_003229717.1 2641280..2641885(-) (ruvA) [Bacillus subtilis strain SRCM117109]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=626282 N0B18_RS14330 WP_003229717.1 2641280..2641885(-) (ruvA) [Bacillus subtilis strain SRCM117109]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408