Detailed information NTG0626244

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LN920_RS04630
• Genome accession: NZ_CP086759
• Coordinates: 957910..958968 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain ACI713
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 952910..963968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LN920_RS04605 (LN920_04605)	aroK	953180..953749 (-)	570	WP_000643712.1	shikimate kinase AroK	-
LN920_RS04610 (LN920_04610)	pilQ	953761..955926 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
LN920_RS04615 (LN920_04615)	pilP	955994..956521 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
LN920_RS04620 (LN920_04620)	pilO	956532..957272 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
LN920_RS04625 (LN920_04625)	pilN	957269..957910 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
LN920_RS04630 (LN920_04630)	pilM	957910..958968 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
LN920_RS04635 (LN920_04635)	ponA	959131..961686 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
LN920_RS04640 (LN920_04640)	-	961704..962528 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
LN920_RS04645 (LN920_04645)	-	962531..962863 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=626244 LN920_RS04630 WP_002014066.1 957910..958968(-) (pilM) [Acinetobacter baumannii strain ACI713]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=626244 LN920_RS04630 WP_002014066.1 957910..958968(-) (pilM) [Acinetobacter baumannii strain ACI713]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423