Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | N288_RS24090 | Genome accession | NC_022524 |
| Coordinates | 4866735..4867256 (-) | Length | 173 a.a. |
| NCBI ID | WP_022544627.1 | Uniprot ID | U5L4I2 |
| Organism | Bacillus infantis NRRL B-14911 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4861735..4872256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N288_RS24070 (N288_25910) | rplI | 4862536..4862985 (-) | 450 | WP_009791713.1 | 50S ribosomal protein L9 | - |
| N288_RS24075 (N288_25915) | - | 4862982..4864955 (-) | 1974 | WP_009791714.1 | DHH family phosphoesterase | - |
| N288_RS24080 (N288_25920) | - | 4864978..4865919 (-) | 942 | WP_022544626.1 | YybS family protein | - |
| N288_RS24085 (N288_25925) | rpsR | 4866435..4866680 (-) | 246 | WP_009796290.1 | 30S ribosomal protein S18 | - |
| N288_RS24090 (N288_25930) | ssbA | 4866735..4867256 (-) | 522 | WP_022544627.1 | single-stranded DNA-binding protein | Machinery gene |
| N288_RS24095 (N288_25935) | rpsF | 4867301..4867588 (-) | 288 | WP_009796293.1 | 30S ribosomal protein S6 | - |
| N288_RS24100 (N288_25940) | - | 4867768..4868925 (-) | 1158 | WP_009796294.1 | glycosyltransferase family 4 protein | - |
| N288_RS24105 (N288_25945) | - | 4868938..4869468 (-) | 531 | WP_022544629.1 | phosphatase PAP2 family protein | - |
| N288_RS24110 (N288_25950) | ychF | 4869938..4871038 (-) | 1101 | WP_009796296.1 | redox-regulated ATPase YchF | - |
| N288_RS24115 (N288_25960) | - | 4871204..4871401 (-) | 198 | WP_022544631.1 | DUF951 domain-containing protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19294.07 Da Isoelectric Point: 4.6909
>NTDB_id=62533 N288_RS24090 WP_022544627.1 4866735..4867256(-) (ssbA) [Bacillus infantis NRRL B-14911]
MMNRVVLVGRLTKDPELRYTPNGVPVASFTLAVNRTFTNQQGEREADFINCVIWRRPAENVANFLKKGSLAGVDGRLQTR
SYEGQDGKRVYVTEVMADSVQFLEPRNASGGAPSGGRNDGNYGGPSREQDFPYGNNDQNQRQNNNRNQGYTRVDEDPFAN
DGQIDISDDDLPF
MMNRVVLVGRLTKDPELRYTPNGVPVASFTLAVNRTFTNQQGEREADFINCVIWRRPAENVANFLKKGSLAGVDGRLQTR
SYEGQDGKRVYVTEVMADSVQFLEPRNASGGAPSGGRNDGNYGGPSREQDFPYGNNDQNQRQNNNRNQGYTRVDEDPFAN
DGQIDISDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=62533 N288_RS24090 WP_022544627.1 4866735..4867256(-) (ssbA) [Bacillus infantis NRRL B-14911]
ATGATGAACCGAGTTGTTCTTGTCGGACGTTTAACGAAAGATCCTGAGTTAAGGTACACGCCAAATGGAGTGCCCGTTGC
TTCCTTCACACTTGCTGTTAACCGTACTTTTACGAATCAGCAGGGAGAAAGGGAAGCTGACTTCATCAACTGTGTGATCT
GGCGCCGTCCAGCTGAAAACGTAGCAAACTTCCTCAAAAAAGGAAGCCTTGCCGGCGTTGATGGACGCCTTCAGACCCGC
AGCTATGAGGGACAGGACGGCAAGCGCGTCTACGTTACAGAAGTAATGGCAGACAGCGTTCAGTTCCTGGAGCCGAGAAA
TGCTTCAGGCGGTGCCCCTAGCGGCGGCCGTAATGACGGAAACTATGGCGGTCCTTCAAGAGAACAGGATTTCCCATATG
GAAATAATGATCAGAATCAGCGACAAAACAATAACCGCAATCAAGGATATACGCGCGTGGATGAAGATCCATTCGCAAAT
GATGGACAAATCGACATCTCTGATGACGATCTGCCATTCTGA
ATGATGAACCGAGTTGTTCTTGTCGGACGTTTAACGAAAGATCCTGAGTTAAGGTACACGCCAAATGGAGTGCCCGTTGC
TTCCTTCACACTTGCTGTTAACCGTACTTTTACGAATCAGCAGGGAGAAAGGGAAGCTGACTTCATCAACTGTGTGATCT
GGCGCCGTCCAGCTGAAAACGTAGCAAACTTCCTCAAAAAAGGAAGCCTTGCCGGCGTTGATGGACGCCTTCAGACCCGC
AGCTATGAGGGACAGGACGGCAAGCGCGTCTACGTTACAGAAGTAATGGCAGACAGCGTTCAGTTCCTGGAGCCGAGAAA
TGCTTCAGGCGGTGCCCCTAGCGGCGGCCGTAATGACGGAAACTATGGCGGTCCTTCAAGAGAACAGGATTTCCCATATG
GAAATAATGATCAGAATCAGCGACAAAACAATAACCGCAATCAAGGATATACGCGCGTGGATGAAGATCCATTCGCAAAT
GATGGACAAATCGACATCTCTGATGACGATCTGCCATTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
71.348 |
100 |
0.734 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
53.763 |
100 |
0.578 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
61.272 |
0.382 |
| ssb | Glaesserella parasuis strain SC1401 |
35.754 |
100 |
0.37 |