Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | KW2_RS11200 | Genome accession | NC_022369 |
| Coordinates | 2329253..2329753 (-) | Length | 166 a.a. |
| NCBI ID | WP_011677241.1 | Uniprot ID | A0A0M2ZSZ2 |
| Organism | Lactococcus cremoris subsp. cremoris KW2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2324253..2334753
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KW2_RS11175 (kw2_2251) | gnd | 2325379..2326284 (-) | 906 | WP_021037990.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| KW2_RS11180 (kw2_2252) | - | 2326653..2327501 (+) | 849 | WP_011677238.1 | MurR/RpiR family transcriptional regulator | - |
| KW2_RS11185 (kw2_2253) | - | 2327540..2327848 (+) | 309 | WP_011836103.1 | DUF960 domain-containing protein | - |
| KW2_RS11190 (kw2_2254) | - | 2327920..2328705 (-) | 786 | WP_041168666.1 | metallophosphoesterase | - |
| KW2_RS11195 (kw2_2255) | rpsR | 2328836..2329081 (-) | 246 | WP_003131952.1 | 30S ribosomal protein S18 | - |
| KW2_RS11200 (kw2_2256) | ssb | 2329253..2329753 (-) | 501 | WP_011677241.1 | single-stranded DNA-binding protein | Machinery gene |
| KW2_RS11205 (kw2_2257) | rpsF | 2329783..2330076 (-) | 294 | WP_011677242.1 | 30S ribosomal protein S6 | - |
| KW2_RS11210 (kw2_2258) | - | 2330270..2331124 (-) | 855 | WP_021037992.1 | undecaprenyl-diphosphate phosphatase | - |
| KW2_RS11215 (kw2_2259) | - | 2331646..2333112 (+) | 1467 | WP_011677244.1 | amino acid permease | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18233.05 Da Isoelectric Point: 5.2166
>NTDB_id=62287 KW2_RS11200 WP_011677241.1 2329253..2329753(-) (ssb) [Lactococcus cremoris subsp. cremoris KW2]
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=62287 KW2_RS11200 WP_011677241.1 2329253..2329753(-) (ssb) [Lactococcus cremoris subsp. cremoris KW2]
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGACCTTCCATTCTAA
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGACCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.62 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.395 |
100 |
0.584 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.855 |
0.373 |
| ssb | Glaesserella parasuis strain SC1401 |
33.898 |
100 |
0.361 |