Detailed information NTG0622266

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LLJ08_RS03085
• Genome accession: NZ_CP086067
• Coordinates: 681012..682349 (-)
• Length: 445 a.a.
• NCBI ID: WP_228208187.1
• Uniprot ID: -
• Organism: Stutzerimonas chloritidismutans strain 6L11
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 676012..687349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLJ08_RS03075 (LLJ08_03080)	-	678065..679660 (-)	1596	WP_014819059.1	response regulator	-
LLJ08_RS03080 (LLJ08_03085)	-	679876..680934 (+)	1059	WP_228208186.1	DUF2333 family protein	-
LLJ08_RS03085 (LLJ08_03090)	pilR	681012..682349 (-)	1338	WP_228208187.1	sigma-54-dependent transcriptional regulator	Regulator
LLJ08_RS03090 (LLJ08_03095)	pilS	682474..684066 (-)	1593	WP_041015969.1	sensor histidine kinase	Regulator
LLJ08_RS03095 (LLJ08_03100)	-	684056..684289 (-)	234	WP_014819063.1	PP0621 family protein	-
LLJ08_RS03100 (LLJ08_03105)	-	684406..685395 (-)	990	WP_014819064.1	outer membrane protein assembly factor BamD	-
LLJ08_RS03105 (LLJ08_03110)	rluD	685601..686575 (+)	975	WP_014819065.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
LLJ08_RS03110 (LLJ08_03115)	pgeF	686572..687306 (+)	735	WP_101275144.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49531.01 Da
• Isoelectric Point: 6.4127

>NTDB_id=622266 LLJ08_RS03085 WP_228208187.1 681012..682349(-) (pilR) [Stutzerimonas chloritidismutans strain 6L11]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVGTALRLRAPTAEMPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQASNGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLAEAM
LRRLAAECGDSSARLHPEALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGVSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=622266 LLJ08_RS03085 WP_228208187.1 681012..682349(-) (pilR) [Stutzerimonas chloritidismutans strain 6L11]
ATGACCGCGCGCCAAAAAGCACTGATCATCGATGACGAGCCGGATATCCGCGAACTGCTGGAAATCACTCTTGGCCGCAT
GAAACTCGATACCCGCAGCGCTCGCAATCTCAAGGAAGCGCGCGAATGCCTGGCCCGCGAGCATTACGACCTGTGCCTTA
CCGATATGCGTCTGCCCGATGGCAGCGGACTGGAGCTGGTGCAATACATTCAGCAACAGCACCCGCAGCTGCCGGTGGCG
ATGATCACTGCATACGGCAGCCTGGATACCGCCATTGGCGCGCTCAAGGCTGGGGCATTCGACTTTCTCACCAAACCGGT
GGACCTCAACCGCTTGCGCGAGCTGGTCGGCACGGCCCTGCGCCTGAGGGCGCCCACAGCGGAAATGCCGGTGGACAGCC
GCCTGCTCGGCAGCTCGCCACCCATGAAGACCCTTCGCAAGCAGATCGGCAAACTCGCCCGCAGCCAGGCGCCGGTTTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCCCGACTGATTCACGAGCAGGGTCCTCGCAGTGAAAAGCCCTT
TGTGCCTGTCAACTGCGGCGCGATCCCGTCGGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGTG
GCGCCATCGAGGACAAGCCCGGGCTATTCCAGGCCTCCAATGGCGGCACGCTGTTCCTCGACGAGGTAGCCGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGGCTGTACGCGCGGTCGGCGGCGCTCAGGAAGTAATGGT
CGATGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCAGCGAAGTGGCCGCAGGCCGTTTCCGCCAGGATCTGTATT
ACCGCTTGAATGTCATCGAACTGCGCGTGCCGCCACTGCGCGAGCGTCGCGAAGACATTGGCCTGCTCGCCGAAGCCATG
CTTCGGCGTCTTGCAGCGGAGTGCGGTGACAGCAGCGCTCGCCTGCACCCGGAGGCTCTGGCCAAGCTGGAAAACTATCG
CTTCCCAGGGAACGTTCGTGAGCTGGAGAACATGCTCGAGCGGGCCTACACACTCTGCGAGGGCGATGAGATCAAGGCGG
GCGATCTACGCTTGGCAGACAGCCCAGGCGTATCGGAGAACGGTGAAGCCAGTCTGGCGCAGATCGACAATCTGGAAGAT
CACCTGGAAGAGATCGAGCGCAAGCTGATCATGCAGGCGCTGGAGGAAACCCGCTGGAATCGCACCGCGGCGGCCCAACG
CCTAGGTTTGACCTTCCGCTCGATGCGTTACCGGCTGAAAAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	49.891	100	0.515
luxO	Vibrio cholerae strain A1552	37.808	100	0.38