Detailed information NTG0622147

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LK685_RS02915
• Genome accession: NZ_CP086061
• Coordinates: 565376..566533 (+)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus sp. BC1-43
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 560376..571533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK685_RS02895 (LK685_02900)	-	560826..562019 (+)	1194	WP_229762762.1	glycosyltransferase family 1 protein	-
LK685_RS02900 (LK685_02905)	-	562164..563240 (+)	1077	WP_003227975.1	MraY family glycosyltransferase	-
LK685_RS02905 (LK685_02910)	tagV	563313..564506 (-)	1194	WP_229762645.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
LK685_RS02910 (LK685_02915)	-	564506..565159 (-)	654	WP_003227979.1	YigZ family protein	-
LK685_RS02915 (LK685_02920)	degS	565376..566533 (+)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
LK685_RS02920 (LK685_02925)	degU	566616..567305 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
LK685_RS02925 (LK685_02930)	-	567403..568248 (+)	846	WP_003244125.1	DegV family protein	-
LK685_RS02930 (LK685_02935)	comFA	568354..569745 (+)	1392	WP_229762646.1	ATP-dependent helicase ComFA	Machinery gene
LK685_RS02935 (LK685_02940)	comFB	569805..570101 (+)	297	WP_015483764.1	late competence protein ComFB	-
LK685_RS02940 (LK685_02945)	comFC	570065..570787 (+)	723	WP_229762647.1	comF operon protein ComFC	Machinery gene
LK685_RS02945 (LK685_02950)	-	570861..571280 (+)	420	WP_038429728.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=622147 LK685_RS02915 WP_003227983.1 565376..566533(+) (degS) [Bacillus sp. BC1-43]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=622147 LK685_RS02915 WP_003227983.1 565376..566533(+) (degS) [Bacillus sp. BC1-43]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATCATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1