Detailed information NTG0619453

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LIT36_RS16800
• Genome accession: NZ_CP085706
• Coordinates: 3395305..3396468 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CK17
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390305..3401468

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIT36_RS16770 (LIT36_16780)	-	3390570..3390989 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
LIT36_RS16775 (LIT36_16785)	comFC	3391063..3391752 (-)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
LIT36_RS16780 (LIT36_16790)	-	3391758..3392042 (-)	285	WP_022553866.1	competence protein ComFB	-
LIT36_RS16785 (LIT36_16795)	comFA	3392100..3393485 (-)	1386	WP_243662307.1	DEAD/DEAH box helicase	Machinery gene
LIT36_RS16790 (LIT36_16800)	-	3393593..3394441 (-)	849	WP_024085866.1	DegV family protein	-
LIT36_RS16795 (LIT36_16805)	degU	3394539..3395228 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
LIT36_RS16800 (LIT36_16810)	degS	3395305..3396468 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
LIT36_RS16805 (LIT36_16815)	-	3396691..3397338 (+)	648	WP_252206629.1	YigZ family protein	-
LIT36_RS16810 (LIT36_16820)	-	3397343..3398557 (+)	1215	WP_003151383.1	LCP family protein	-
LIT36_RS16815 (LIT36_16825)	-	3398647..3399723 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
LIT36_RS16820 (LIT36_16830)	-	3399856..3401052 (-)	1197	WP_044052856.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=619453 LIT36_RS16800 WP_003151385.1 3395305..3396468(-) (degS) [Bacillus velezensis strain CK17]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=619453 LIT36_RS16800 WP_003151385.1 3395305..3396468(-) (degS) [Bacillus velezensis strain CK17]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948