Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | IUJ58_RS15905 | Genome accession | NZ_CP085485 |
| Coordinates | 3139744..3140796 (+) | Length | 350 a.a. |
| NCBI ID | WP_028411611.1 | Uniprot ID | - |
| Organism | Priestia aryabhattai strain KNUC0118 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3134744..3145796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUJ58_RS15870 (IUJ58_15840) | - | 3135310..3135516 (+) | 207 | WP_028411617.1 | YqgQ family protein | - |
| IUJ58_RS15875 (IUJ58_15845) | - | 3135519..3136487 (+) | 969 | WP_182003449.1 | ROK family glucokinase | - |
| IUJ58_RS15880 (IUJ58_15850) | - | 3136599..3137501 (+) | 903 | WP_216143613.1 | M14 family metallopeptidase | - |
| IUJ58_RS15885 (IUJ58_15855) | - | 3137537..3137713 (-) | 177 | WP_028411614.1 | DUF2759 domain-containing protein | - |
| IUJ58_RS15890 (IUJ58_15860) | - | 3137923..3138555 (+) | 633 | WP_216143614.1 | MBL fold metallo-hydrolase | - |
| IUJ58_RS15895 (IUJ58_15865) | - | 3138593..3138829 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| IUJ58_RS15900 (IUJ58_15870) | - | 3139091..3139474 (+) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| IUJ58_RS15905 (IUJ58_15875) | comGA | 3139744..3140796 (+) | 1053 | WP_028411611.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IUJ58_RS15910 (IUJ58_15880) | comGB | 3140787..3141833 (+) | 1047 | WP_013059176.1 | competence type IV pilus assembly protein ComGB | - |
| IUJ58_RS15915 (IUJ58_15885) | comGC | 3141848..3142159 (+) | 312 | WP_193424339.1 | competence type IV pilus major pilin ComGC | - |
| IUJ58_RS15920 (IUJ58_15890) | comGD | 3142146..3142583 (+) | 438 | WP_016765559.1 | competence type IV pilus minor pilin ComGD | - |
| IUJ58_RS15925 (IUJ58_15895) | - | 3142567..3142905 (+) | 339 | WP_216143616.1 | type II secretion system protein | - |
| IUJ58_RS15930 (IUJ58_15900) | comGF | 3142902..3143339 (+) | 438 | WP_216143617.1 | competence type IV pilus minor pilin ComGF | - |
| IUJ58_RS15935 (IUJ58_15905) | comGG | 3143329..3143703 (+) | 375 | WP_114896746.1 | competence type IV pilus minor pilin ComGG | - |
| IUJ58_RS15940 (IUJ58_15910) | - | 3143747..3143932 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| IUJ58_RS15945 (IUJ58_15915) | - | 3143956..3144780 (-) | 825 | WP_274447501.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39596.97 Da Isoelectric Point: 9.0586
>NTDB_id=618367 IUJ58_RS15905 WP_028411611.1 3139744..3140796(+) (comGA) [Priestia aryabhattai strain KNUC0118]
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=618367 IUJ58_RS15905 WP_028411611.1 3139744..3140796(+) (comGA) [Priestia aryabhattai strain KNUC0118]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGCCGAAGTTCAGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAACTTATTTTAAAAAGGGTCATTTCAAAAGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGCGGAATGGATATTGGCGAACGCAGAAAACCTCAAAATGGTGCGTTGACA
ACTTCCGTTGATCACTATCAAGTAAATCTGCGTTTATCTACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTACCTCATCAACAGTCTACATCTCTCAAACATTTATCTCTGTTTCCTGAACATACAAAAAAACTTATTTCTCTCTTGA
AATTCTCCCATGGATTAATTATTTTTACCGGCCCTACAGGATCGGGTAAAACCACTACTCTATACACTCTTTTACATGAA
GTAAAGCATCTTTTTAACCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTGAATGAACGCGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACATTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCTGGAAAATGCCACCCGGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGCCGAAGTTCAGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAACTTATTTTAAAAAGGGTCATTTCAAAAGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGCGGAATGGATATTGGCGAACGCAGAAAACCTCAAAATGGTGCGTTGACA
ACTTCCGTTGATCACTATCAAGTAAATCTGCGTTTATCTACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTACCTCATCAACAGTCTACATCTCTCAAACATTTATCTCTGTTTCCTGAACATACAAAAAAACTTATTTCTCTCTTGA
AATTCTCCCATGGATTAATTATTTTTACCGGCCCTACAGGATCGGGTAAAACCACTACTCTATACACTCTTTTACATGAA
GTAAAGCATCTTTTTAACCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTGAATGAACGCGCAGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACATTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCTGGAAAATGCCACCCGGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCGGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |