Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SANR_RS10950 Genome accession   NC_022239
Coordinates   2232869..2233636 (+) Length   255 a.a.
NCBI ID   WP_003038259.1    Uniprot ID   I0S839
Organism   Streptococcus anginosus C238     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2227869..2238636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS10920 (SANR_2121) comE/comE2 2228434..2229183 (-) 750 WP_003038257.1 competence system response regulator transcription factor ComE Regulator
  SANR_RS10925 (SANR_2122) comD/comD2 2229183..2230505 (-) 1323 WP_003038254.1 GHKL domain-containing protein Regulator
  SANR_RS11380 (SANR_2123) - 2230520..2230669 (-) 150 WP_003038250.1 bacteriocin -
  SANR_RS10940 rlmH 2230951..2231430 (-) 480 WP_004225060.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SANR_RS10945 (SANR_2125) htrA 2231624..2232814 (+) 1191 WP_003032033.1 S1C family serine protease Regulator
  SANR_RS10950 (SANR_2126) spo0J 2232869..2233636 (+) 768 WP_003038259.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29600.14 Da        Isoelectric Point: 9.3660

>NTDB_id=61699 SANR_RS10950 WP_003038259.1 2232869..2233636(+) (spo0J) [Streptococcus anginosus C238]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVIKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=61699 SANR_RS10950 WP_003038259.1 2232869..2233636(+) (spo0J) [Streptococcus anginosus C238]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTGCATTCCCAACAGACAAAAACTGTAATAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0S839

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.51

100

0.545

Multiple sequence alignment