Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SANR_RS03505 Genome accession   NC_022239
Coordinates   706781..707785 (+) Length   334 a.a.
NCBI ID   WP_020999536.1    Uniprot ID   -
Organism   Streptococcus anginosus C238     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 701781..712785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS03485 (SANR_0682) - 701821..702645 (+) 825 WP_148290569.1 hypothetical protein -
  SANR_RS03490 (SANR_0683) - 702668..703603 (-) 936 WP_020999535.1 IS30 family transposase -
  SANR_RS03495 (SANR_0684) - 703722..705064 (+) 1343 Protein_662 LTA synthase family protein -
  SANR_RS03500 (SANR_0685) - 705434..706516 (-) 1083 WP_003034946.1 M24 family metallopeptidase -
  SANR_RS03505 (SANR_0686) ccpA 706781..707785 (+) 1005 WP_020999536.1 catabolite control protein A Regulator
  SANR_RS03510 (SANR_0687) - 707965..708963 (+) 999 WP_020999537.1 glycosyltransferase family 4 protein -
  SANR_RS03515 (SANR_0688) - 708965..710278 (+) 1314 WP_003035045.1 glycosyltransferase family 4 protein -
  SANR_RS03520 (SANR_0689) - 710305..710637 (+) 333 WP_003035050.1 hypothetical protein -
  SANR_RS03525 (SANR_0690) micA 710938..711639 (+) 702 WP_020999538.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37026.15 Da        Isoelectric Point: 5.8289

>NTDB_id=61669 SANR_RS03505 WP_020999536.1 706781..707785(+) (ccpA) [Streptococcus anginosus C238]
MNTDETVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNVPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSIRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=61669 SANR_RS03505 WP_020999536.1 706781..707785(+) (ccpA) [Streptococcus anginosus C238]
ATGAACACAGACGAAACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTTTTGGAAGTGATTGACCGCCTTGATTACCGTCCAAATG
CGGTGGCGCGTGGTCTTGCTAGCAAAAAGACGACGACTGTTGGAGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTTAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACAGTTGATGTGGAGCATCAATTACCAAGT
GTGAATATTGACTATAAGCAAGCGACCATGGATGCAGTTGAACGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAACTGGCAGCTGGATTGTTAAATGGATTATCAGACAAAGGTGTAAATGTACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCACAGGTAGCACGCTTTACCCGTCCAAATTTGACGACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTG
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAATAAGAAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-331)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

89.521

100

0.895
  ccpA Streptococcus pneumoniae D39

88.024

100

0.88
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

99.102

0.572

Multiple sequence alignment