Detailed information NTG0616028

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: M6G09_RS11395
• Genome accession: NZ_CP102359
• Coordinates: 2668812..2670098 (-)
• Length: 428 a.a.
• NCBI ID: WP_031040350.1
• Uniprot ID: A0ABS7WDK0
• Organism: Streptomyces sp. B146
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2663812..2675098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M6G09_RS11385 (M6G09_11415)	-	2664975..2667599 (-)	2625	WP_277724855.1	valine--tRNA ligase	-
M6G09_RS11390 (M6G09_11420)	-	2667736..2668707 (+)	972	WP_224300576.1	hypothetical protein	-
M6G09_RS11395 (M6G09_11425)	clpX	2668812..2670098 (-)	1287	WP_031040350.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
M6G09_RS11400 (M6G09_11430)	clpP	2670290..2671003 (-)	714	WP_031040348.1	ATP-dependent Clp protease proteolytic subunit	Regulator
M6G09_RS11405 (M6G09_11435)	clpP	2671054..2671659 (-)	606	WP_031040345.1	ATP-dependent Clp protease proteolytic subunit	Regulator
M6G09_RS11410 (M6G09_11440)	tig	2672029..2673456 (-)	1428	WP_195888290.1	trigger factor	-
M6G09_RS11425 (M6G09_11455)	-	2674436..2674630 (-)	195	WP_031040337.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46828.59 Da
• Isoelectric Point: 4.7389

>NTDB_id=616028 M6G09_RS11395 WP_031040350.1 2668812..2670098(-) (clpX) [Streptomyces sp. B146]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKREIESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=616028 M6G09_RS11395 WP_031040350.1 2668812..2670098(-) (clpX) [Streptomyces sp. B146]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGAGCA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTGGCGCGCATGCTGAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCCTCGATCACCCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCCCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGATCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGGGTCATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTCTCCAACGTCAACCCCACGCTGATCCCCCGGGATTCGCGTGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCCTGA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.027	94.159	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521