Detailed information NTG0615527

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LIN98_RS02715
• Genome accession: NZ_CP085096
• Coordinates: 532876..533994 (+)
• Length: 372 a.a.
• NCBI ID: WP_005567106.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 4S
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 527876..538994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN98_RS02690	lexA	530483..531106 (+)	624	WP_005544873.1	transcriptional repressor LexA	-
LIN98_RS02695	rpsF	531258..531635 (+)	378	WP_005541284.1	30S ribosomal protein S6	-
LIN98_RS02700	priB	531622..531948 (+)	327	WP_005567107.1	primosomal replication protein N	-
LIN98_RS02705	rpsR	531961..532191 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
LIN98_RS02710	rplI	532207..532656 (+)	450	WP_005544876.1	50S ribosomal protein L9	-
LIN98_RS02715	dprA	532876..533994 (+)	1119	WP_005567106.1	DNA-processing protein DprA	Machinery gene
LIN98_RS02720	glpQ	534035..535132 (-)	1098	WP_148326225.1	glycerophosphodiester phosphodiesterase	-
LIN98_RS02725	glpT	535366..536808 (-)	1443	WP_005570215.1	glycerol-3-phosphate transporter	-
LIN98_RS02730	rlmB	537141..537878 (-)	738	WP_005570218.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41635.98 Da
• Isoelectric Point: 6.5725

>NTDB_id=615527 LIN98_RS02715 WP_005567106.1 532876..533994(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 4S]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSALSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHLKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQKREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=615527 LIN98_RS02715 WP_005567106.1 532876..533994(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 4S]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCGCCGCCGGTATTGTTCGTCAAAGGCGCGACAAGTGC
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGCCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACTACCAATGGTTTCATCATTACCAGCGGGTTAGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCTCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAAGAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAACTGGAATTACAGGATTTAATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.298	100	0.64
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Vibrio campbellii strain DS40M4	43.207	98.925	0.427
dprA	Legionella pneumophila strain ERS1305867	40.541	99.462	0.403