Detailed information NTG0615485

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: NQZ91_RS07690
• Genome accession: NZ_CP102145
• Coordinates: 1537595..1538593 (+)
• Length: 332 a.a.
• NCBI ID: WP_024388009.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DNS20
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1532595..1543593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ91_RS07670 (NQZ91_07670)	purE	1532771..1533259 (+)	489	WP_029172079.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
NQZ91_RS07675 (NQZ91_07675)	purK	1533246..1534313 (+)	1068	WP_257117273.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
NQZ91_RS07680 (NQZ91_07680)	purB	1534495..1535787 (+)	1293	WP_257117275.1	adenylosuccinate lyase	-
NQZ91_RS07685 (NQZ91_07685)	-	1536065..1537342 (+)	1278	WP_257117277.1	MerR family transcriptional regulator	-
NQZ91_RS07690 (NQZ91_07690)	ruvB	1537595..1538593 (+)	999	WP_024388009.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NQZ91_RS07695 (NQZ91_07695)	-	1538593..1539339 (+)	747	WP_257117278.1	GNAT family N-acetyltransferase	-
NQZ91_RS07700 (NQZ91_07700)	-	1539341..1539949 (+)	609	WP_257117280.1	HAD-IA family hydrolase	-
NQZ91_RS07705 (NQZ91_07705)	comR	1540069..1540977 (+)	909	WP_257117281.1	helix-turn-helix domain-containing protein	Regulator
NQZ91_RS07710 (NQZ91_07710)	-	1541242..1542477 (+)	1236	WP_257117282.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
NQZ91_RS07715 (NQZ91_07715)	-	1542513..1542737 (+)	225	WP_125266400.1	hypothetical protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37513.04 Da
• Isoelectric Point: 4.4673

>NTDB_id=615485 NQZ91_RS07690 WP_024388009.1 1537595..1538593(+) (ruvB) [Streptococcus suis strain DNS20]
MTRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVNI
KQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLID
DTITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATAK
AYEHLGYPYTEK

Nucleotide

• Length: 999 bp

>NTDB_id=615485 NQZ91_RS07690 WP_024388009.1 1537595..1538593(+) (ruvB) [Streptococcus suis strain DNS20]
ATGACTAGAATTTTAGATATGGAACAAATGCAGGATGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAACGA
ATACATCGGTCAGGACAAGGTCAAGGACCAGCTGAAAATCTTTATCGAGGCGGCCAAGCTCCGTGATGAAGCCTTGGACC
ATACGCTTCTGTTTGGCCCTCCGGGTCTGGGGAAGACCACCATGGCCTTTGTCATCGCCAACGAATTGGGGGTCAATATC
AAGCAGACTAGTGGTCCTGTTATTGAAAAAGCAGGTGACTTGGTTGCCCTTCTCAATGACTTGGAGCCAGGCGATGTCCT
CTTTATCGATGAAATCCACCGTATGCCCATGGCGGTCGAGGAGATTCTCTACTCAGCCATGGAAGACTTCTACATCGACA
TCATGATTGGAGCAGGGGAGGCCAGCCGCTCTGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACTCGT
GCAGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAGTATTACGAACTGGCTGATTTGAC
GGAGATTGTCGAGCGGACGGCGGATATCTTTGACATGGAGATTACCCATGAAGCTGCTATTGAGCTGGCTCGTCGGTCTC
GTGGAACTCCCCGTATCGCCAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGATGGCCTGATTGAC
GACACCATTACAGACAAGGCCTTGACTATGCTGGATGTGGACCGTGAAGGTCTGGACTATGTGGACCAGAAGATTCTCCG
TACCATGATTGAAATGTACGGCGGCGGTCCCGTCGGCCTCAACACCCTGTCGGTCAATATCGCCGAGGAGCGAGAAACGG
TGGAGGACATGTATGAGCCCTACCTGATTCAGCAGGGCTTCCTTATGCGGACACGGACGGGGCGGGTTGCGACAGCAAAG
GCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.361	100	0.904
ruvB	Streptococcus pneumoniae R6	90.06	100	0.901
ruvB	Streptococcus pneumoniae D39	90.06	100	0.901
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.824	97.289	0.572
ruvB	Helicobacter pylori 26695	51.227	98.193	0.503
ruvB	Synechocystis sp. PCC 6803	50.479	94.277	0.476