Detailed information NTG0615477

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LIN95_RS02340
• Genome accession: NZ_CP085094
• Coordinates: 437639..438757 (-)
• Length: 372 a.a.
• NCBI ID: WP_005567106.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 5S
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 432639..443757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN95_RS02325	rlmB	433753..434490 (+)	738	WP_005544885.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
LIN95_RS02330	glpT	434823..436265 (+)	1443	WP_005567103.1	glycerol-3-phosphate transporter	-
LIN95_RS02335	glpQ	436500..437582 (+)	1083	WP_005567105.1	glycerophosphodiester phosphodiesterase	-
LIN95_RS02340	dprA	437639..438757 (-)	1119	WP_005567106.1	DNA-processing protein DprA	Machinery gene
LIN95_RS02345	rplI	438977..439426 (-)	450	WP_005544876.1	50S ribosomal protein L9	-
LIN95_RS02350	rpsR	439442..439672 (-)	231	WP_005541294.1	30S ribosomal protein S18	-
LIN95_RS02355	priB	439685..440011 (-)	327	WP_005567107.1	primosomal replication protein N	-
LIN95_RS02360	rpsF	439998..440375 (-)	378	WP_005541284.1	30S ribosomal protein S6	-
LIN95_RS02365	lexA	440527..441150 (-)	624	WP_005544873.1	transcriptional repressor LexA	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41635.98 Da
• Isoelectric Point: 6.5725

>NTDB_id=615477 LIN95_RS02340 WP_005567106.1 437639..438757(-) (dprA) [Aggregatibacter actinomycetemcomitans strain 5S]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSALSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHLKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQKREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=615477 LIN95_RS02340 WP_005567106.1 437639..438757(-) (dprA) [Aggregatibacter actinomycetemcomitans strain 5S]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCGCCGCCGGTATTGTTCGTCAAAGGCGCGACAAGTGC
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGCCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAATGGTTTCATCATTACCAGCGGGTTAGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCTCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAAGAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAACTGGAATTACAGGATTTAATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.298	100	0.64
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Vibrio campbellii strain DS40M4	43.207	98.925	0.427
dprA	Legionella pneumophila strain ERS1305867	40.541	99.462	0.403