Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | LF296_RS01415 | Genome accession | NZ_CP085083 |
| Coordinates | 303160..303687 (+) | Length | 175 a.a. |
| NCBI ID | WP_004776058.1 | Uniprot ID | N8WDU9 |
| Organism | Acinetobacter vivianii strain KJ-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 298160..308687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LF296_RS01400 (LF296_01400) | comM | 300726..301784 (+) | 1059 | WP_004776062.1 | pilus assembly protein PilM | Machinery gene |
| LF296_RS01405 (LF296_01405) | pilN | 301784..302440 (+) | 657 | WP_123775342.1 | PilN domain-containing protein | Machinery gene |
| LF296_RS01410 (LF296_01410) | pilO | 302437..303156 (+) | 720 | WP_272655301.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LF296_RS01415 (LF296_01415) | pilP | 303160..303687 (+) | 528 | WP_004776058.1 | pilus assembly protein PilP | Machinery gene |
| LF296_RS01420 (LF296_01420) | pilQ | 303749..305884 (+) | 2136 | WP_171068057.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| LF296_RS01425 (LF296_01425) | aroK | 305895..306464 (+) | 570 | WP_104021896.1 | shikimate kinase AroK | - |
| LF296_RS01430 (LF296_01430) | aroB | 306484..307566 (+) | 1083 | WP_272655302.1 | 3-dehydroquinate synthase | - |
| LF296_RS01435 (LF296_01435) | - | 307586..308443 (+) | 858 | WP_272655303.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19310.51 Da Isoelectric Point: 9.3444
>NTDB_id=615102 LF296_RS01415 WP_004776058.1 303160..303687(+) (pilP) [Acinetobacter vivianii strain KJ-1]
MNNYKLLLSLLLGLGLVGCDSRIDAVNQKMAEIRNQPPLPIEPAPVFTPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGRSSETIALIQTPDGQIERVQVGSYLGMNQGRIIKISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MNNYKLLLSLLLGLGLVGCDSRIDAVNQKMAEIRNQPPLPIEPAPVFTPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGRSSETIALIQTPDGQIERVQVGSYLGMNQGRIIKISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=615102 LF296_RS01415 WP_004776058.1 303160..303687(+) (pilP) [Acinetobacter vivianii strain KJ-1]
ATGAATAATTATAAATTACTACTTAGCTTGTTGCTTGGATTGGGGTTGGTTGGATGTGATTCGCGTATTGATGCAGTCAA
CCAGAAGATGGCTGAAATCCGAAATCAGCCGCCTTTACCGATTGAACCTGCACCTGTATTTACACCTGTACCGTTATTTA
ACTATTCGGCGCATCAGCTGAAAAGCCCATTTATGCCAAGTTCTTTAGCTGCCGAGTTAAAGATTATGGCAGGCAAACGT
GTGTATCCGAACTTTAATCGTCAGCCACAACCGCTAGAGAGCTATGCGCTTGAATCATTAAATATGAAGGGTAGCATGCG
TGGCAGAAGCAGCGAGACGATTGCTCTGATTCAAACACCTGATGGGCAAATCGAGCGCGTACAAGTGGGTAGTTATTTGG
GGATGAATCAGGGGCGCATCATTAAAATTAGCCCGACTCAGATAGATTTGGTGGAAATCGTACCTGATGGACGAGAAGGT
TACGTAGAAAGACCTCGAACACTCGTTCTCATTGGGCCAGCACCATAA
ATGAATAATTATAAATTACTACTTAGCTTGTTGCTTGGATTGGGGTTGGTTGGATGTGATTCGCGTATTGATGCAGTCAA
CCAGAAGATGGCTGAAATCCGAAATCAGCCGCCTTTACCGATTGAACCTGCACCTGTATTTACACCTGTACCGTTATTTA
ACTATTCGGCGCATCAGCTGAAAAGCCCATTTATGCCAAGTTCTTTAGCTGCCGAGTTAAAGATTATGGCAGGCAAACGT
GTGTATCCGAACTTTAATCGTCAGCCACAACCGCTAGAGAGCTATGCGCTTGAATCATTAAATATGAAGGGTAGCATGCG
TGGCAGAAGCAGCGAGACGATTGCTCTGATTCAAACACCTGATGGGCAAATCGAGCGCGTACAAGTGGGTAGTTATTTGG
GGATGAATCAGGGGCGCATCATTAAAATTAGCCCGACTCAGATAGATTTGGTGGAAATCGTACCTGATGGACGAGAAGGT
TACGTAGAAAGACCTCGAACACTCGTTCTCATTGGGCCAGCACCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
81.714 |
100 |
0.817 |
| comL | Acinetobacter baylyi ADP1 |
73.714 |
100 |
0.737 |