Detailed information NTG0614846

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: NQZ97_RS00380
• Genome accession: NZ_CP102136
• Coordinates: 66290..67291 (+)
• Length: 333 a.a.
• NCBI ID: WP_105127845.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M105052_S26
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 61290..72291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ97_RS00355 (NQZ97_00355)	-	61628..62401 (+)	774	WP_029179963.1	membrane protein	-
NQZ97_RS00360 (NQZ97_00360)	-	62404..64116 (+)	1713	WP_170238150.1	ABC transporter ATP-binding protein	-
NQZ97_RS00365 (NQZ97_00365)	-	64130..64417 (+)	288	WP_249338908.1	hypothetical protein	-
NQZ97_RS00370 (NQZ97_00370)	-	64529..64702 (+)	174	WP_162840697.1	hypothetical protein	-
NQZ97_RS00375 (NQZ97_00375)	-	64828..66096 (+)	1269	WP_170238151.1	MerR family transcriptional regulator	-
NQZ97_RS00380 (NQZ97_00380)	ruvB	66290..67291 (+)	1002	WP_105127845.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NQZ97_RS00385 (NQZ97_00385)	-	67359..67982 (+)	624	WP_044672706.1	HAD-IA family hydrolase	-
NQZ97_RS00390 (NQZ97_00390)	comR	68053..68952 (+)	900	WP_004195451.1	helix-turn-helix domain-containing protein	Regulator
NQZ97_RS00395 (NQZ97_00395)	-	69170..70390 (+)	1221	WP_256787687.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
NQZ97_RS00400 (NQZ97_00400)	-	70581..72104 (+)	1524	WP_256787686.1	quinol oxidase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 37629.12 Da
• Isoelectric Point: 4.4673

>NTDB_id=614846 NQZ97_RS00380 WP_105127845.1 66290..67291(+) (ruvB) [Streptococcus suis strain M105052_S26]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELSRRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK

Nucleotide

• Length: 1002 bp

>NTDB_id=614846 NQZ97_RS00380 WP_105127845.1 66290..67291(+) (ruvB) [Streptococcus suis strain M105052_S26]
ATGACAAATCGAATTTTAGATATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCGCAGAAATTAAA
TGAATACATCGGTCAGGACAAGGTTAAGGACCAGCTGAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGACCTCCAGGTTTGGGGAAGACCACCATGGCCTTTGTCATCGCCAACGAATTGGGCGTTAAT
ATCAAGCAGACCAGTGGTCCTGTTATTGAAAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTCGAGGAAATTCTCTACTCTGCTATGGAGGATTTCTACATCG
ACATTATGATTGGGGCTGGGGAGGCCAGCCGGTCCGTGCATTTGGAGTTGCCACCTTTTACCCTGATTGGAGCAACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCTCGTTTTGGGATTACCGGGCACATGGAGTACTATGAACTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCCGCTATCGAGCTGTCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCCAACCGTCTGCTCAAGCGGGTGCGGGATTTTGCACAGATTATGGGCGACGGCCTGATT
GACGATAGCATCACGGACAAGGCCCTAACCATGCTGGATGTGGACCGCGAGGGGCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCCGTCGGCCTCAACACCCTGTCGGTCAATATTGCCGAGGAGCGTGAGA
CGGTGGAGGACATGTACGAGCCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACACGGACGGGGCGGGTTGCTACAGCC
AAGGCCTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (182-255)

• RuvB C-terminal winged helix domain (WHD_RuvB) (257-326)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (21-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.03	99.399	0.895
ruvB	Streptococcus pneumoniae R6	89.728	99.399	0.892
ruvB	Streptococcus pneumoniae D39	89.728	99.399	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.282	97.898	0.571
ruvB	Helicobacter pylori 26695	50.76	98.799	0.502
ruvB	Synechocystis sp. PCC 6803	50.16	93.994	0.471