Detailed information NTG0614844

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LG951_RS17140
• Genome accession: NZ_CP085037
• Coordinates: 3279799..3280974 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain BIM B-171
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3274799..3285974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG951_RS17110 (LG951_17110)	-	3274967..3275386 (-)	420	WP_003212865.1	TIGR03826 family flagellar region protein	-
LG951_RS17115 (LG951_17115)	comFC	3275443..3276129 (-)	687	WP_226804191.1	ComF family protein	Machinery gene
LG951_RS17120 (LG951_17120)	-	3276126..3276419 (-)	294	WP_050944343.1	late competence development ComFB family protein	-
LG951_RS17125 (LG951_17125)	comFA	3276486..3277613 (-)	1128	WP_226804192.1	DEAD/DEAH box helicase	Machinery gene
LG951_RS17130 (LG951_17130)	-	3277985..3278827 (-)	843	WP_226804196.1	DegV family protein	-
LG951_RS17135 (LG951_17135)	degU	3279045..3279734 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
LG951_RS17140 (LG951_17140)	degS	3279799..3280974 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
LG951_RS17145 (LG951_17145)	-	3281196..3281864 (+)	669	WP_003212936.1	YigZ family protein	-
LG951_RS17150 (LG951_17150)	-	3281849..3282937 (+)	1089	WP_212045589.1	LCP family protein	-
LG951_RS17155 (LG951_17155)	-	3282972..3284039 (-)	1068	WP_003212692.1	glycosyltransferase family 4 protein	-
LG951_RS17160 (LG951_17160)	tuaH	3284174..3285364 (-)	1191	WP_226805380.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=614844 LG951_RS17140 WP_003213166.1 3279799..3280974(-) (degS) [Bacillus pumilus strain BIM B-171]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=614844 LG951_RS17140 WP_003213166.1 3279799..3280974(-) (degS) [Bacillus pumilus strain BIM B-171]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTTGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTGCAAGTGGAACTCACTATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGTCAAGTTGGCGTGTTACTT
GAAGATGCTCAAGCAAAACAAGATTTTGGACTTAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTATCCCGTGA
AATTCACGACGGTCCGGCCCAAATGCTGGCAAACGTAATGATGCGTTCCGAATTAATTGAACGTATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATCACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTTACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTTGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841