Detailed information NTG0614841

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQZ98_RS11165
• Genome accession: NZ_CP102135
• Coordinates: 2202774..2203868 (+)
• Length: 364 a.a.
• NCBI ID: WP_024411901.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M106471_S40
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2197774..2208868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ98_RS11140 (NQZ98_11140)	pgsA	2198286..2198825 (-)	540	WP_014736596.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NQZ98_RS11145 (NQZ98_11145)	rodZ	2198845..2199699 (-)	855	WP_171997242.1	cytoskeleton protein RodZ	-
NQZ98_RS11150 (NQZ98_11150)	yfmH	2199781..2201064 (-)	1284	WP_171997241.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NQZ98_RS11155 (NQZ98_11155)	yfmF	2201061..2202314 (-)	1254	WP_109372117.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NQZ98_RS11160 (NQZ98_11160)	yaaA	2202388..2202771 (+)	384	WP_024411900.1	S4 domain-containing protein YaaA	-
NQZ98_RS11165 (NQZ98_11165)	recF	2202774..2203868 (+)	1095	WP_024411901.1	DNA replication/repair protein RecF	Machinery gene
NQZ98_RS11170 (NQZ98_11170)	guaB	2204138..2205619 (-)	1482	WP_015647590.1	IMP dehydrogenase	-
NQZ98_RS11175 (NQZ98_11175)	trpS	2205851..2206876 (-)	1026	WP_024400058.1	tryptophan--tRNA ligase	-
NQZ98_RS11180 (NQZ98_11180)	-	2207231..2208103 (+)	873	WP_024400057.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42218.33 Da
• Isoelectric Point: 7.0557

>NTDB_id=614841 NQZ98_RS11165 WP_024411901.1 2202774..2203868(+) (recF) [Streptococcus suis strain M106471_S40]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYKTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=614841 NQZ98_RS11165 WP_024411901.1 2202774..2203868(+) (recF) [Streptococcus suis strain M106471_S40]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTGCTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAACCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACAAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTAGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442