Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LG319_RS01395 Genome accession   NZ_CP085027
Coordinates   286337..287005 (+) Length   222 a.a.
NCBI ID   WP_053024588.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SLM-175     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 281337..292005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG319_RS01370 (LG319_01370) - 281735..282868 (+) 1134 WP_306419472.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  LG319_RS01375 (LG319_01375) - 282889..283824 (+) 936 WP_110708891.1 LCP family protein -
  LG319_RS01380 (LG319_01380) - 283914..285389 (-) 1476 WP_016930640.1 alkaline phosphatase -
  LG319_RS01385 (LG319_01385) - 285787..285957 (+) 171 WP_180529094.1 hypothetical protein -
  LG319_RS01390 (LG319_01390) - 286143..286307 (+) 165 WP_016930641.1 hypothetical protein -
  LG319_RS01395 (LG319_01395) braR 286337..287005 (+) 669 WP_053024588.1 response regulator transcription factor Regulator
  LG319_RS01400 (LG319_01400) braS 287008..287904 (+) 897 WP_053024587.1 sensor histidine kinase Regulator
  LG319_RS01405 (LG319_01405) - 288079..288828 (+) 750 WP_053024586.1 ABC transporter ATP-binding protein -
  LG319_RS01410 (LG319_01410) - 288830..290821 (+) 1992 WP_053024585.1 ABC transporter permease -
  LG319_RS01415 (LG319_01415) - 290911..291915 (+) 1005 WP_053024584.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25723.56 Da        Isoelectric Point: 4.6536

>NTDB_id=614710 LG319_RS01395 WP_053024588.1 286337..287005(+) (braR) [Staphylococcus haemolyticus strain SLM-175]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVIDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=614710 LG319_RS01395 WP_053024588.1 286337..287005(+) (braR) [Staphylococcus haemolyticus strain SLM-175]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCGCAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCCTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAAAAGTGTTGGGAGTCGGAGAATTTTATAGA
TGATAATACTTTAGCAGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTATAGATTTAATTGAAACTA
AGAAGAATGTTGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77