Detailed information NTG0614649

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: NQZ84_RS00345
• Genome accession: NZ_CP102094
• Coordinates: 58175..59176 (+)
• Length: 333 a.a.
• NCBI ID: WP_044677096.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 12RC1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 53175..64176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ84_RS00325 (NQZ84_00325)	-	54790..55626 (+)	837	WP_044683418.1	ABC transporter ATP-binding protein	-
NQZ84_RS00330 (NQZ84_00330)	-	55619..56362 (+)	744	WP_024389672.1	ABC transporter permease	-
NQZ84_RS00335 (NQZ84_00335)	-	56414..56587 (+)	174	WP_162840697.1	hypothetical protein	-
NQZ84_RS00340 (NQZ84_00340)	-	56713..57981 (+)	1269	WP_053042400.1	MerR family transcriptional regulator	-
NQZ84_RS00345 (NQZ84_00345)	ruvB	58175..59176 (+)	1002	WP_044677096.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NQZ84_RS00350 (NQZ84_00350)	-	59244..59867 (+)	624	WP_024414287.1	HAD-IA family hydrolase	-
NQZ84_RS00355 (NQZ84_00355)	comR	59971..60870 (+)	900	WP_044677095.1	helix-turn-helix domain-containing protein	Regulator
NQZ84_RS00360 (NQZ84_00360)	-	61078..62298 (+)	1221	WP_044670228.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
NQZ84_RS00365 (NQZ84_00365)	-	62489..64012 (+)	1524	WP_044769565.1	quinol oxidase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 37581.06 Da
• Isoelectric Point: 4.4673

>NTDB_id=614649 NQZ84_RS00345 WP_044677096.1 58175..59176(+) (ruvB) [Streptococcus suis strain 12RC1]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEVYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK

Nucleotide

• Length: 1002 bp

>NTDB_id=614649 NQZ84_RS00345 WP_044677096.1 58175..59176(+) (ruvB) [Streptococcus suis strain 12RC1]
ATGACAAATCGAATTTTAGATATGGAACAAATGCAGGACGAGGAGTACGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTGAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGACCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAGTATTACGAACTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACCCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCCAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGGACCATGATTGAGGTGTACGGCGGTGGTCCTGTCGGCCTCAACACTCTGTCGGTCAATATTGCCGAGGAGCGTGAGA
CGGTGGAGGACATGTACGAACCTTACCTGATTCAGCAGGGATTCCTCATGCGGACGCGGACGGGGCGGGTTGCGACAGCC
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (257-326)

• RuvB AAA lid domain (AAA_lid_4) (182-255)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (21-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.03	99.399	0.895
ruvB	Streptococcus pneumoniae R6	89.728	99.399	0.892
ruvB	Streptococcus pneumoniae D39	89.728	99.399	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.589	97.898	0.574
ruvB	Helicobacter pylori 26695	51.064	98.799	0.505
ruvB	Synechocystis sp. PCC 6803	50.479	93.994	0.474