Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAKOR_RS10085 | Genome accession | NC_022226 |
| Coordinates | 2005996..2006466 (-) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus subsp. aureus CN1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2000996..2011466
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAKOR_RS10020 (SAKOR_01949) | - | 2001195..2001611 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| SAKOR_RS10025 (SAKOR_01950) | - | 2001639..2001839 (-) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| SAKOR_RS10030 (SAKOR_01951) | - | 2001839..2001988 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| SAKOR_RS10035 (SAKOR_01952) | - | 2001985..2002371 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| SAKOR_RS10040 (SAKOR_01953) | - | 2002368..2002574 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| SAKOR_RS10045 (SAKOR_01954) | - | 2002571..2002816 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| SAKOR_RS10050 (SAKOR_01955) | - | 2002853..2003389 (-) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| SAKOR_RS14980 (SAKOR_01956) | - | 2003382..2003552 (-) | 171 | WP_000714403.1 | hypothetical protein | - |
| SAKOR_RS10055 (SAKOR_01957) | - | 2003539..2003793 (-) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| SAKOR_RS10060 (SAKOR_01958) | - | 2003808..2004050 (-) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| SAKOR_RS10065 (SAKOR_01959) | - | 2004054..2004422 (-) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| SAKOR_RS10070 (SAKOR_01960) | - | 2004435..2004839 (-) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SAKOR_RS10075 (SAKOR_01961) | - | 2004848..2005066 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| SAKOR_RS10080 (SAKOR_01962) | - | 2005073..2005966 (-) | 894 | WP_000148321.1 | DnaD domain-containing protein | - |
| SAKOR_RS10085 (SAKOR_01963) | ssbA | 2005996..2006466 (-) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| SAKOR_RS10090 (SAKOR_01964) | - | 2006467..2007084 (-) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| SAKOR_RS10095 (SAKOR_01965) | - | 2007165..2008085 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| SAKOR_RS10100 (SAKOR_01966) | - | 2008087..2010030 (-) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| SAKOR_RS14450 (SAKOR_01967) | - | 2010039..2010302 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| SAKOR_RS10105 (SAKOR_01968) | - | 2010311..2010571 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| SAKOR_RS10110 (SAKOR_01969) | - | 2010576..2010878 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| SAKOR_RS10115 (SAKOR_01970) | - | 2010973..2011134 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| SAKOR_RS10120 (SAKOR_01971) | - | 2011131..2011454 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=61431 SAKOR_RS10085 WP_000610648.1 2005996..2006466(-) (ssbA) [Staphylococcus aureus subsp. aureus CN1]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=61431 SAKOR_RS10085 WP_000610648.1 2005996..2006466(-) (ssbA) [Staphylococcus aureus subsp. aureus CN1]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |