Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | EL263_RS12055 | Genome accession | NZ_AP018938 |
| Coordinates | 1214231..1214395 (-) | Length | 54 a.a. |
| NCBI ID | WP_109701449.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain ATCC 49619 | ||
| Function | processing and transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1209231..1219395
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL263_RS06355 (SPAT_1206) | - | 1210200..1210442 (+) | 243 | WP_000710764.1 | type B 50S ribosomal protein L31 | - |
| EL263_RS06360 (SPAT_1207) | - | 1210499..1210717 (-) | 219 | WP_000028150.1 | hypothetical protein | - |
| EL263_RS06365 | - | 1210714..1211465 (-) | 752 | Protein_1210 | transposase | - |
| EL263_RS06370 (SPAT_1209) | gdhA | 1211802..1213148 (+) | 1347 | WP_000199564.1 | NADP-specific glutamate dehydrogenase | - |
| EL263_RS06380 (SPAT_1210) | - | 1213644..1213814 (-) | 171 | WP_000711942.1 | hypothetical protein | - |
| EL263_RS06385 (SPAT_1211) | comA/nlmT | 1213827..1214174 (-) | 348 | WP_078133805.1 | ATP-binding cassette domain-containing protein | Regulator |
| EL263_RS12055 | comA | 1214231..1214395 (-) | 165 | WP_109701449.1 | hypothetical protein | Regulator |
| EL263_RS06390 | - | 1214421..1214930 (-) | 510 | Protein_1215 | transposase | - |
| EL263_RS06395 (SPAT_1213) | - | 1214939..1215653 (+) | 715 | Protein_1216 | IS630 family transposase | - |
| EL263_RS06400 (SPAT_1214) | - | 1215887..1216339 (-) | 453 | Protein_1217 | hypothetical protein | - |
| EL263_RS06405 (SPAT_1216) | - | 1216341..1216628 (-) | 288 | WP_000869754.1 | hypothetical protein | - |
| EL263_RS06410 | - | 1217213..1218564 (+) | 1352 | WP_088804224.1 | IS3-like element ISSpn4 family transposase | - |
| EL263_RS12060 | - | 1218664..1219062 (-) | 399 | Protein_1220 | ATP-binding cassette domain-containing protein | - |
Sequence
Protein
Download Length: 54 a.a. Molecular weight: 6025.02 Da Isoelectric Point: 8.6616
>NTDB_id=61292 EL263_RS12055 WP_109701449.1 1214231..1214395(-) (comA) [Streptococcus pneumoniae strain ATCC 49619]
MPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKH
MPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKH
Nucleotide
Download Length: 165 bp
>NTDB_id=61292 EL263_RS12055 WP_109701449.1 1214231..1214395(-) (comA) [Streptococcus pneumoniae strain ATCC 49619]
ATACCATCAGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAACATAACTTTAAAGC
ACTAG
ATACCATCAGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAACATAACTTTAAAGC
ACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Streptococcus mitis NCTC 12261 |
42.308 |
96.296 |
0.407 |
| comA | Streptococcus pneumoniae Rx1 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus pneumoniae D39 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus pneumoniae R6 |
40.385 |
96.296 |
0.389 |
| comA | Streptococcus mitis SK321 |
40.385 |
96.296 |
0.389 |