Detailed information NTG0612649

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LG401_RS15980
• Genome accession: NZ_CP084711
• Coordinates: 3131274..3132449 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain AR03
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3126274..3137449

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG401_RS15950 (LG401_15950)	-	3126441..3126860 (-)	420	WP_060597396.1	TIGR03826 family flagellar region protein	-
LG401_RS15955 (LG401_15955)	comFC	3126917..3127603 (-)	687	WP_189288297.1	ComF family protein	Machinery gene
LG401_RS15960 (LG401_15960)	-	3127600..3127893 (-)	294	WP_060597398.1	late competence development ComFB family protein	-
LG401_RS15965 (LG401_15965)	comFA	3127960..3129339 (-)	1380	WP_142393300.1	DEAD/DEAH box helicase	Machinery gene
LG401_RS15970 (LG401_15970)	-	3129460..3130302 (-)	843	WP_095285726.1	DegV family protein	-
LG401_RS15975 (LG401_15975)	degU	3130520..3131209 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
LG401_RS15980 (LG401_15980)	degS	3131274..3132449 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
LG401_RS15985 (LG401_15985)	-	3132671..3133339 (+)	669	WP_216454630.1	YigZ family protein	-
LG401_RS15990 (LG401_15990)	-	3133324..3134415 (+)	1092	WP_216454629.1	LCP family protein	-
LG401_RS15995 (LG401_15995)	-	3134451..3135518 (-)	1068	WP_034660156.1	glycosyltransferase family 4 protein	-
LG401_RS16000 (LG401_16000)	tuaH	3135650..3136840 (-)	1191	WP_404978217.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=612649 LG401_RS15980 WP_003213166.1 3131274..3132449(-) (degS) [Bacillus pumilus strain AR03]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=612649 LG401_RS15980 WP_003213166.1 3131274..3132449(-) (degS) [Bacillus pumilus strain AR03]
ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAACTCGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGGGAGGCCTACGAAAAAGCACATAATCTACAAGTGGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTTGGCGTGTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCCCAGATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTCAGAGACCGTG
GGACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGTA
TGATGGAAAAACCAAGATTACGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841