Detailed information NTG0608981

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: M6G08_RS03965
• Genome accession: NZ_CP101137
• Coordinates: 881583..882869 (-)
• Length: 428 a.a.
• NCBI ID: WP_073723047.1
• Uniprot ID: -
• Organism: Streptomyces sp. M92
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 876583..887869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M6G08_RS03955 (M6G08_03965)	-	877759..880410 (-)	2652	WP_272585796.1	valine--tRNA ligase	-
M6G08_RS03960 (M6G08_03970)	-	880549..881514 (+)	966	WP_272585797.1	hypothetical protein	-
M6G08_RS03965 (M6G08_03975)	clpX	881583..882869 (-)	1287	WP_073723047.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
M6G08_RS03970 (M6G08_03980)	clpP	883061..883741 (-)	681	WP_272585798.1	ATP-dependent Clp protease proteolytic subunit	Regulator
M6G08_RS03975 (M6G08_03985)	clpP	883825..884430 (-)	606	WP_051005918.1	ATP-dependent Clp protease proteolytic subunit	Regulator
M6G08_RS03980 (M6G08_03990)	tig	884765..886171 (-)	1407	WP_272585799.1	trigger factor	-
M6G08_RS03995 (M6G08_04005)	-	887395..887841 (+)	447	WP_272585800.1	SANT/Myb-like DNA-binding domain-containing protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46786.51 Da
• Isoelectric Point: 4.7360

>NTDB_id=608981 M6G08_RS03965 WP_073723047.1 881583..882869(-) (clpX) [Streptomyces sp. M92]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGAQIRSKRETESKDQFEQVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=608981 M6G08_RS03965 WP_073723047.1 881583..882869(-) (clpX) [Streptomyces sp. M92]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTGGCGGAGACCA
GCGAGGTGCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCC
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCCCAAGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCCCGCATGCTGAACGTGCCCTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCGTCGATCACGCGTGACGTCAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGGCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGGGAGACCGAGTCCAAGGACCAGTTCGAGCAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTGCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCAGACCAGGCCATCCTCCGCCAGACCGGCGCGCGTGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGAGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCTCTCCAACGTCAACCCGACGCTGATCCCGCGGGATTCGCGGGGGCGGGGTTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523