Detailed information NTG0606860

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LA346_RS09445
• Genome accession: NZ_CP083627
• Coordinates: 1819263..1820216 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495896.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain FDAARGOS_1508
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1814263..1825216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA346_RS09420 (LA346_09420)	rpmG	1815006..1815155 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
LA346_RS09425 (LA346_09425)	secG	1815195..1815428 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
LA346_RS09430 (LA346_09430)	rnr	1815530..1817884 (+)	2355	WP_000654871.1	ribonuclease R	-
LA346_RS09435 (LA346_09435)	smpB	1817847..1818314 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
LA346_RS09440 (LA346_09440)	tehB	1818330..1819190 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
LA346_RS09445 (LA346_09445)	coiA	1819263..1820216 (+)	954	WP_000495896.1	competence protein CoiA	Machinery gene
LA346_RS09450 (LA346_09450)	pepF	1820235..1822037 (+)	1803	WP_000244124.1	oligoendopeptidase F	Regulator
LA346_RS09455 (LA346_09455)	-	1822039..1822752 (+)	714	WP_001810028.1	O-methyltransferase	-
LA346_RS09460 (LA346_09460)	prsA	1822819..1823760 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
LA346_RS09465 (LA346_09465)	-	1823879..1824220 (-)	342	Protein_1846	transposase	-
LA346_RS09470 (LA346_09470)	-	1824632..1824727 (+)	96	Protein_1847	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=606860 LA346_RS09445 WP_000495896.1 1819263..1820216(+) (coiA) [Streptococcus pneumoniae strain FDAARGOS_1508]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=606860 LA346_RS09445 WP_000495896.1 1819263..1820216(+) (coiA) [Streptococcus pneumoniae strain FDAARGOS_1508]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429