Detailed information NTG0606326

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: K9N56_RS20555
• Genome accession: NZ_CP083580
• Coordinates: 4008294..4009451 (-)
• Length: 385 a.a.
• NCBI ID: WP_006639267.1
• Uniprot ID: M5P1Q6
• Organism: Bacillus sp. PM8313
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4003294..4014451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9N56_RS20525 (K9N56_20525)	-	4003513..4003932 (-)	420	WP_006639262.1	TIGR03826 family flagellar region protein	-
K9N56_RS20530 (K9N56_20530)	comFC	4003990..4004724 (-)	735	WP_006639263.1	ComF family protein	Machinery gene
K9N56_RS20535 (K9N56_20535)	-	4004681..4004965 (-)	285	WP_006639264.1	late competence development ComFB family protein	-
K9N56_RS20540 (K9N56_20540)	comFA	4005022..4006368 (-)	1347	WP_006639265.1	DEAD/DEAH box helicase	Machinery gene
K9N56_RS20545 (K9N56_20545)	-	4006561..4007403 (-)	843	WP_006639266.1	DegV family protein	-
K9N56_RS20550 (K9N56_20550)	degU	4007523..4008212 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
K9N56_RS20555 (K9N56_20555)	degS	4008294..4009451 (-)	1158	WP_006639267.1	sensor histidine kinase	Regulator
K9N56_RS20560 (K9N56_20560)	-	4009673..4010311 (+)	639	WP_006639268.1	YigZ family protein	-
K9N56_RS20565 (K9N56_20565)	-	4010328..4011407 (+)	1080	WP_006639269.1	LCP family protein	-
K9N56_RS20570 (K9N56_20570)	-	4011550..4012614 (-)	1065	WP_006639270.1	glycosyltransferase family 4 protein	-
K9N56_RS20575 (K9N56_20575)	tuaH	4012737..4013918 (-)	1182	WP_006639271.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44603.33 Da
• Isoelectric Point: 7.0403

>NTDB_id=606326 K9N56_RS20555 WP_006639267.1 4008294..4009451(-) (degS) [Bacillus sp. PM8313]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=606326 K9N56_RS20555 WP_006639267.1 4008294..4009451(-) (degS) [Bacillus sp. PM8313]
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: M5P1Q6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894