Detailed information NTG0605449

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LAJ50_RS13740
• Genome accession: NZ_CP083376
• Coordinates: 3075653..3077122 (+)
• Length: 489 a.a.
• NCBI ID: WP_130549735.1
• Uniprot ID: -
• Organism: Pseudoxanthomonas sp. X-1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3070653..3082122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LAJ50_RS13725 (LAJ50_13715)	sucD	3071680..3072555 (-)	876	WP_130549732.1	succinate--CoA ligase subunit alpha	-
LAJ50_RS13730 (LAJ50_13720)	sucC	3072579..3073748 (-)	1170	WP_130549733.1	ADP-forming succinate--CoA ligase subunit beta	-
LAJ50_RS13735 (LAJ50_13725)	-	3073934..3075562 (+)	1629	WP_130549734.1	ATP-binding protein	-
LAJ50_RS13740 (LAJ50_13730)	pilR	3075653..3077122 (+)	1470	WP_130549735.1	sigma-54 dependent transcriptional regulator	Regulator
LAJ50_RS13745 (LAJ50_13735)	pilA2	3077465..3077869 (+)	405	WP_138652516.1	pilin	Machinery gene
LAJ50_RS13750 (LAJ50_13740)	-	3077978..3079690 (+)	1713	WP_138652514.1	hypothetical protein	-
LAJ50_RS13755 (LAJ50_13745)	pilB	3079755..3081479 (+)	1725	WP_138652512.1	type IV-A pilus assembly ATPase PilB	Machinery gene

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 52702.23 Da
• Isoelectric Point: 6.6450

>NTDB_id=605449 LAJ50_RS13740 WP_130549735.1 3075653..3077122(+) (pilR) [Pseudoxanthomonas sp. X-1]
MSDPRSALIVDDERDIRELLTLTLGRMGIRIDTAANLGEARELLARNAYDLCFTDMRLPDGNGIELVGEISRQFPKTPVA
MITAFGNVELAVEALKAGAFDFVSKPVDINVLRGLVKHALELNNAERPAPAPAPAQHAMRLLGQSPAMAELRDTIAKVAR
SQAPVYILGESGVGKELVARTIHEQGARASGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKQGLFQAASGGTLFLD
EVAELPLPMQVKLLRAIQEKAVRPVGASGEIQVDVRILSATHKDLGELAHDGRFRHDLYYRINVIELRVPPLRERTGDLP
QLTGAILNRLAGSQGRPAPRLTAAAADALSHYAFPGNVRELENILERAMAMADEDAIDASDLRLPQGERRPAAAAQPPAP
SAAPPQDHDPFRPAPAPQFGQGLPPQPGAPASHSPSDAEGPLPSYIEQMERAAIHKALEDNRWNKTKAAAQLGITFRALR
YKLKKLGIE

Nucleotide

• Length: 1470 bp

>NTDB_id=605449 LAJ50_RS13740 WP_130549735.1 3075653..3077122(+) (pilR) [Pseudoxanthomonas sp. X-1]
ATGAGCGACCCCCGAAGCGCATTGATCGTCGACGACGAACGCGACATCCGCGAACTGCTGACCCTGACCCTGGGCCGCAT
GGGCATTCGCATCGACACCGCCGCCAACCTGGGCGAAGCGCGCGAGCTGCTGGCCCGCAACGCCTACGACCTGTGCTTCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAGCTGGTCGGCGAGATCTCGCGGCAGTTCCCCAAGACGCCGGTGGCG
ATGATCACCGCGTTCGGCAACGTCGAACTGGCGGTGGAGGCGCTCAAGGCGGGTGCCTTCGACTTCGTCAGCAAGCCCGT
GGACATCAACGTCCTGCGCGGCCTGGTCAAGCACGCGCTGGAACTCAACAATGCCGAGCGCCCCGCGCCCGCTCCCGCGC
CGGCCCAGCACGCCATGCGCCTGCTCGGGCAATCGCCGGCCATGGCCGAGCTGCGCGATACCATCGCCAAGGTCGCGCGC
AGCCAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTGGGCAAGGAACTGGTGGCCCGCACCATCCACGAGCAGGGCGC
GCGCGCGTCCGGACCGTTCGTGCCGGTCAACTGCGGCGCGATTCCAGCCGAACTGATGGAAAGCGAGTTCTTCGGCCACA
AGAAAGGCAGCTTCACCGGGGCGCACGCCGACAAGCAGGGCCTGTTCCAGGCGGCCAGCGGTGGCACGCTGTTCCTGGAC
GAGGTGGCCGAGTTGCCGCTGCCCATGCAGGTCAAGCTGTTGCGCGCCATCCAGGAGAAGGCCGTGCGCCCGGTCGGCGC
ATCGGGCGAGATCCAGGTCGACGTGCGCATCCTGTCCGCCACGCACAAGGACCTGGGCGAACTGGCCCACGACGGCCGCT
TCCGTCATGACCTCTACTACCGCATCAACGTCATCGAACTGCGCGTGCCCCCGCTGCGCGAGCGTACCGGCGACCTGCCG
CAACTCACCGGTGCCATCCTCAACCGGCTGGCGGGAAGCCAGGGGCGCCCGGCCCCGCGCCTGACCGCCGCCGCGGCCGA
TGCGCTGTCGCATTACGCCTTCCCCGGCAATGTCCGCGAGCTGGAGAACATCCTCGAGCGCGCCATGGCCATGGCCGATG
AGGACGCCATCGACGCCAGCGACCTGCGCCTGCCCCAGGGCGAGCGCCGGCCGGCCGCGGCAGCGCAGCCTCCCGCGCCA
TCCGCTGCCCCGCCCCAGGACCACGACCCGTTCCGCCCAGCGCCCGCGCCCCAGTTCGGCCAGGGCCTGCCGCCGCAGCC
GGGCGCACCGGCCTCGCACTCACCCAGCGATGCCGAAGGCCCGCTGCCCTCCTACATCGAGCAGATGGAGCGCGCCGCCA
TCCACAAGGCGCTGGAGGACAACCGCTGGAACAAGACCAAGGCGGCGGCGCAGCTCGGCATCACTTTCCGCGCGCTGCGC
TACAAGCTCAAGAAGCTCGGCATCGAATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (446-486)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.619	99.182	0.601
pilR	Acinetobacter baumannii strain A118	46.998	98.773	0.464