Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | K3A98_RS04280 | Genome accession | NZ_CP083259 |
| Coordinates | 858737..859207 (+) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain HL25274 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 853737..864207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3A98_RS04240 (K3A98_000840) | - | 853749..854072 (+) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| K3A98_RS04245 (K3A98_000841) | - | 854069..854230 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| K3A98_RS04250 (K3A98_000842) | - | 854325..854627 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| K3A98_RS04255 (K3A98_000843) | - | 854632..854892 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| K3A98_RS04260 (K3A98_000844) | - | 854901..855164 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| K3A98_RS04265 (K3A98_000845) | - | 855173..857116 (+) | 1944 | WP_000700569.1 | AAA family ATPase | - |
| K3A98_RS04270 (K3A98_000846) | - | 857118..858038 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| K3A98_RS04275 (K3A98_000847) | - | 858119..858736 (+) | 618 | WP_078065545.1 | MBL fold metallo-hydrolase | - |
| K3A98_RS04280 (K3A98_000848) | ssbA | 858737..859207 (+) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| K3A98_RS04285 (K3A98_000849) | - | 859237..860130 (+) | 894 | WP_000148321.1 | DnaD domain protein | - |
| K3A98_RS04290 (K3A98_000850) | - | 860137..860355 (+) | 219 | WP_000338529.1 | hypothetical protein | - |
| K3A98_RS04295 (K3A98_000851) | - | 860364..860768 (+) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| K3A98_RS04300 (K3A98_000852) | - | 860781..861149 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| K3A98_RS04305 (K3A98_000853) | - | 861153..861395 (+) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| K3A98_RS04310 (K3A98_000854) | - | 861410..861664 (+) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| K3A98_RS04315 (K3A98_000855) | - | 861651..861821 (+) | 171 | WP_000714403.1 | hypothetical protein | - |
| K3A98_RS04320 (K3A98_000856) | - | 861814..862350 (+) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| K3A98_RS04325 (K3A98_000857) | - | 862387..862632 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| K3A98_RS04330 (K3A98_000858) | - | 862629..862835 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| K3A98_RS04335 (K3A98_000859) | - | 862832..863218 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| K3A98_RS04340 (K3A98_000860) | rinB | 863215..863364 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| K3A98_RS04345 (K3A98_000861) | - | 863364..863564 (+) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| K3A98_RS04350 (K3A98_000862) | - | 863592..864008 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=605142 K3A98_RS04280 WP_000610648.1 858737..859207(+) (ssbA) [Staphylococcus aureus strain HL25274]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=605142 K3A98_RS04280 WP_000610648.1 858737..859207(+) (ssbA) [Staphylococcus aureus strain HL25274]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |