Detailed information NTG0603281

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: NIY06_RS15065
• Genome accession: NZ_CP099858
• Coordinates: 3094005..3095123 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A54S
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3089005..3100123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIY06_RS15055 (NIY06_15055)	-	3092121..3092813 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
NIY06_RS15060 (NIY06_15060)	pilT	3092940..3093977 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
NIY06_RS15065 (NIY06_15065)	pilU	3094005..3095123 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
NIY06_RS15070 (NIY06_15070)	fur	3095193..3095630 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
NIY06_RS15075 (NIY06_15075)	bamE	3095742..3096140 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
NIY06_RS15080 (NIY06_15080)	-	3096195..3096518 (-)	324	WP_000442587.1	RnfH family protein	-
NIY06_RS15085 (NIY06_15085)	-	3096518..3097585 (-)	1068	WP_002019572.1	hypothetical protein	-
NIY06_RS15090 (NIY06_15090)	-	3097738..3098193 (-)	456	WP_000782976.1	bacteriohemerythrin	-
NIY06_RS15095 (NIY06_15095)	-	3098446..3099294 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=603281 NIY06_RS15065 WP_000347039.1 3094005..3095123(+) (pilU) [Acinetobacter baumannii strain A54S]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=603281 NIY06_RS15065 WP_000347039.1 3094005..3095123(+) (pilU) [Acinetobacter baumannii strain A54S]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395