Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | K6959_RS17280 | Genome accession | NZ_CP082780 |
| Coordinates | 3561688..3564123 (+) | Length | 811 a.a. |
| NCBI ID | WP_223087151.1 | Uniprot ID | - |
| Organism | Bacillus aquiflavi strain 3H-10 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3556688..3569123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6959_RS17260 (K6959_17260) | - | 3557871..3559094 (-) | 1224 | WP_223087148.1 | MFS transporter | - |
| K6959_RS17265 (K6959_17265) | - | 3559558..3560019 (+) | 462 | WP_163241575.1 | CtsR family transcriptional regulator | - |
| K6959_RS17270 (K6959_17270) | - | 3560049..3560597 (+) | 549 | WP_223087149.1 | UvrB/UvrC motif-containing protein | - |
| K6959_RS17275 (K6959_17275) | - | 3560601..3561671 (+) | 1071 | WP_223088425.1 | protein arginine kinase | - |
| K6959_RS17280 (K6959_17280) | clpC | 3561688..3564123 (+) | 2436 | WP_223087151.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| K6959_RS17285 (K6959_17285) | radA | 3564832..3566214 (+) | 1383 | WP_163241581.1 | DNA repair protein RadA | Machinery gene |
| K6959_RS17290 (K6959_17290) | - | 3566678..3567760 (+) | 1083 | WP_223087152.1 | PIN/TRAM domain-containing protein | - |
| K6959_RS17295 (K6959_17295) | ispD | 3567780..3568502 (+) | 723 | WP_163241585.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| K6959_RS17300 (K6959_17300) | ispF | 3568477..3568956 (+) | 480 | WP_163241723.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90530.50 Da Isoelectric Point: 6.3056
>NTDB_id=602168 K6959_RS17280 WP_223087151.1 3561688..3564123(+) (clpC) [Bacillus aquiflavi strain 3H-10]
MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGPEKIQQEVENLIGKGQSVAQTIHY
TPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAGNHQAGNAASANT
PTLDSLARDLTSIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVQNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRQKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPITVDEPTLEESVQILYGLRDRYEAHHRVSITDEAIDAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPKLKELELQLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREKLEKTQKSWKEKQGKENSEVTVEDIAHVV
SSWTGIPVSKLAQTETQKLLKLEEILHSRVIGQEEAVIAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
VMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSTGRTVDFRNTILIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVLEELKKAFRPEFLNRVDEMIVFHALERKHLK
EIVSLMSEQLINRLKEQHIELELTEAALKKITEIGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGQKVVIDVENEE
FIVKTTKTVNV
MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGPEKIQQEVENLIGKGQSVAQTIHY
TPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAGNHQAGNAASANT
PTLDSLARDLTSIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVQNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRQKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPITVDEPTLEESVQILYGLRDRYEAHHRVSITDEAIDAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPKLKELELQLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREKLEKTQKSWKEKQGKENSEVTVEDIAHVV
SSWTGIPVSKLAQTETQKLLKLEEILHSRVIGQEEAVIAVSKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
VMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSTGRTVDFRNTILIMTSNVGAEALKRNKYVGFNIQDGEQDYKDMKGKVLEELKKAFRPEFLNRVDEMIVFHALERKHLK
EIVSLMSEQLINRLKEQHIELELTEAALKKITEIGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGQKVVIDVENEE
FIVKTTKTVNV
Nucleotide
Download Length: 2436 bp
>NTDB_id=602168 K6959_RS17280 WP_223087151.1 3561688..3564123(+) (clpC) [Bacillus aquiflavi strain 3H-10]
ATGATGTTTGGACGTTTTACAGAAAGAGCCCAAAAAGTATTAGCATTAGCTCAGGAAGAGGCTGTACGTTTAGGTCATAA
TAATATTGGAACAGAACATATATTATTAGGGCTTGTTAGAGAAGGAGAAGGGATAGCAGCAAAGGCTTTATATGCACTTG
GACTAGGTCCTGAAAAAATTCAGCAGGAAGTTGAAAATTTAATAGGGAAAGGCCAAAGCGTTGCTCAGACAATTCATTAT
ACTCCTCGTGCAAAAAAGGTAACGGAGCTTTCAATGGATGAAGCTCGAAAACTTGGGCATTCTTATGTTGGAACAGAACA
TATATTGCTTGGATTAATTCGTGAAGGTGAAGGCGTTGCAGCAAGAGTATTAAATAATTTAGGAGTAAGTTTAAATAAAG
CACGGCAACAAGTGCTTCAATTACTTGGGAGTAATGAGGCGGGAAATCACCAAGCAGGGAATGCTGCTAGTGCTAACACC
CCTACATTGGATAGTTTAGCTCGTGACTTAACATCGATAGCTCGAGAAGGAAGTTTAGATCCTGTTATAGGAAGAAGCAA
GGAAATACAACGGGTAATCGAGGTATTAAGCCGTCGTACTAAAAACAATCCTGTTTTAATCGGTGAGCCGGGAGTAGGAA
AAACAGCAATTGCCGAAGGATTAGCACAACAAATTGTCCAAAATGAAGTACCTGAAATATTACGTGATAAACGCGTAATG
ACACTTGATATGGGAACAGTTGTAGCAGGTACGAAATATCGCGGGGAATTTGAAGATCGTCAAAAAAAAGTGATGGATGA
AATTCGTCAAGCCGGAAATATTATTTTATTTATTGATGAGCTTCATACTTTAATTGGTGCTGGAGGGGCTGAAGGTGCAA
TTGATGCATCAAATATATTAAAGCCTTCATTAGCTCGGGGTGAACTTCAATGTATTGGGGCAACTACGTTAGATGAATAT
CGAAAATATATTGAAAAAGATGCCGCTCTTGAACGGCGTTTCCAACCAATTACGGTTGATGAACCAACACTAGAGGAATC
TGTGCAAATTTTATACGGCTTACGGGATAGATATGAGGCGCATCATCGCGTTTCGATAACAGATGAAGCGATTGATGCAG
CAGTAAAATTATCAGACAGATATATTTCAGATCGCTTCTTACCTGATAAAGCAATCGATTTAATTGATGAAGCTGGATCT
AAAGTCAGATTGCGTTCTTATACTACCCCTCCTAAATTAAAAGAGCTTGAATTACAGCTGGAGGAAGTTAGAAAGGAAAA
AGATGCAGCAGTACAGAGTCAAGAGTTTGAAAAAGCGGCTTCCTTACGTGATTCAGAACAACGATTGCGAGAAAAACTTG
AGAAAACGCAAAAAAGTTGGAAGGAAAAACAGGGGAAAGAAAATAGTGAAGTTACCGTTGAGGATATTGCCCATGTAGTA
TCAAGCTGGACCGGAATTCCTGTCTCAAAATTAGCTCAAACGGAAACACAAAAGCTCCTAAAATTAGAAGAAATTTTACA
CTCTCGTGTCATTGGTCAAGAAGAGGCAGTGATTGCTGTATCGAAAGCCGTTAGAAGAGCCCGAGCAGGATTAAAAGACC
CGAAACGCCCAATTGGATCATTTATTTTTCTTGGGCCAACAGGGGTTGGAAAAACAGAATTGGCGCGTGCACTTGCAGAA
GTTATGTTCGGTGATGAAGATGCGATGATTAGAATTGATATGTCGGAGTATATGGAAAAGCACTCAACATCTAGATTAGT
TGGTTCTCCTCCAGGGTATGTCGGTTATGATGAAGGGGGACAACTAACGGAAAAGGTGCGTAGAAAACCATATTCTGTCG
TTTTATTAGACGAAATTGAAAAGGCGCATCCTGATGTATTCAATATCCTCCTTCAAGTGTTAGAGGATGGAAGACTTACG
GATTCAACTGGACGTACTGTTGATTTCAGAAATACTATTTTAATTATGACATCAAATGTTGGAGCAGAAGCGTTAAAGCG
AAATAAGTATGTCGGTTTCAATATTCAAGATGGCGAGCAAGATTATAAAGATATGAAAGGAAAAGTTCTTGAGGAGCTGA
AAAAAGCATTTCGCCCAGAGTTTTTAAACCGGGTAGATGAAATGATCGTCTTCCATGCACTTGAAAGGAAACACCTAAAA
GAAATTGTGTCATTAATGTCTGAACAATTAATCAATCGATTAAAAGAGCAACATATTGAATTAGAATTAACAGAAGCTGC
ATTGAAAAAAATTACCGAAATAGGCTATGATCCTGAATACGGGGCTCGACCTCTTCGCAGAGCGATTCAGAAGCATATTG
AAGATCGGCTGTCAGAGGAATTGTTAAAAGGAACTGTTTTAACAGGACAGAAAGTTGTCATTGATGTAGAAAATGAAGAG
TTTATTGTAAAAACAACGAAAACAGTAAATGTATAA
ATGATGTTTGGACGTTTTACAGAAAGAGCCCAAAAAGTATTAGCATTAGCTCAGGAAGAGGCTGTACGTTTAGGTCATAA
TAATATTGGAACAGAACATATATTATTAGGGCTTGTTAGAGAAGGAGAAGGGATAGCAGCAAAGGCTTTATATGCACTTG
GACTAGGTCCTGAAAAAATTCAGCAGGAAGTTGAAAATTTAATAGGGAAAGGCCAAAGCGTTGCTCAGACAATTCATTAT
ACTCCTCGTGCAAAAAAGGTAACGGAGCTTTCAATGGATGAAGCTCGAAAACTTGGGCATTCTTATGTTGGAACAGAACA
TATATTGCTTGGATTAATTCGTGAAGGTGAAGGCGTTGCAGCAAGAGTATTAAATAATTTAGGAGTAAGTTTAAATAAAG
CACGGCAACAAGTGCTTCAATTACTTGGGAGTAATGAGGCGGGAAATCACCAAGCAGGGAATGCTGCTAGTGCTAACACC
CCTACATTGGATAGTTTAGCTCGTGACTTAACATCGATAGCTCGAGAAGGAAGTTTAGATCCTGTTATAGGAAGAAGCAA
GGAAATACAACGGGTAATCGAGGTATTAAGCCGTCGTACTAAAAACAATCCTGTTTTAATCGGTGAGCCGGGAGTAGGAA
AAACAGCAATTGCCGAAGGATTAGCACAACAAATTGTCCAAAATGAAGTACCTGAAATATTACGTGATAAACGCGTAATG
ACACTTGATATGGGAACAGTTGTAGCAGGTACGAAATATCGCGGGGAATTTGAAGATCGTCAAAAAAAAGTGATGGATGA
AATTCGTCAAGCCGGAAATATTATTTTATTTATTGATGAGCTTCATACTTTAATTGGTGCTGGAGGGGCTGAAGGTGCAA
TTGATGCATCAAATATATTAAAGCCTTCATTAGCTCGGGGTGAACTTCAATGTATTGGGGCAACTACGTTAGATGAATAT
CGAAAATATATTGAAAAAGATGCCGCTCTTGAACGGCGTTTCCAACCAATTACGGTTGATGAACCAACACTAGAGGAATC
TGTGCAAATTTTATACGGCTTACGGGATAGATATGAGGCGCATCATCGCGTTTCGATAACAGATGAAGCGATTGATGCAG
CAGTAAAATTATCAGACAGATATATTTCAGATCGCTTCTTACCTGATAAAGCAATCGATTTAATTGATGAAGCTGGATCT
AAAGTCAGATTGCGTTCTTATACTACCCCTCCTAAATTAAAAGAGCTTGAATTACAGCTGGAGGAAGTTAGAAAGGAAAA
AGATGCAGCAGTACAGAGTCAAGAGTTTGAAAAAGCGGCTTCCTTACGTGATTCAGAACAACGATTGCGAGAAAAACTTG
AGAAAACGCAAAAAAGTTGGAAGGAAAAACAGGGGAAAGAAAATAGTGAAGTTACCGTTGAGGATATTGCCCATGTAGTA
TCAAGCTGGACCGGAATTCCTGTCTCAAAATTAGCTCAAACGGAAACACAAAAGCTCCTAAAATTAGAAGAAATTTTACA
CTCTCGTGTCATTGGTCAAGAAGAGGCAGTGATTGCTGTATCGAAAGCCGTTAGAAGAGCCCGAGCAGGATTAAAAGACC
CGAAACGCCCAATTGGATCATTTATTTTTCTTGGGCCAACAGGGGTTGGAAAAACAGAATTGGCGCGTGCACTTGCAGAA
GTTATGTTCGGTGATGAAGATGCGATGATTAGAATTGATATGTCGGAGTATATGGAAAAGCACTCAACATCTAGATTAGT
TGGTTCTCCTCCAGGGTATGTCGGTTATGATGAAGGGGGACAACTAACGGAAAAGGTGCGTAGAAAACCATATTCTGTCG
TTTTATTAGACGAAATTGAAAAGGCGCATCCTGATGTATTCAATATCCTCCTTCAAGTGTTAGAGGATGGAAGACTTACG
GATTCAACTGGACGTACTGTTGATTTCAGAAATACTATTTTAATTATGACATCAAATGTTGGAGCAGAAGCGTTAAAGCG
AAATAAGTATGTCGGTTTCAATATTCAAGATGGCGAGCAAGATTATAAAGATATGAAAGGAAAAGTTCTTGAGGAGCTGA
AAAAAGCATTTCGCCCAGAGTTTTTAAACCGGGTAGATGAAATGATCGTCTTCCATGCACTTGAAAGGAAACACCTAAAA
GAAATTGTGTCATTAATGTCTGAACAATTAATCAATCGATTAAAAGAGCAACATATTGAATTAGAATTAACAGAAGCTGC
ATTGAAAAAAATTACCGAAATAGGCTATGATCCTGAATACGGGGCTCGACCTCTTCGCAGAGCGATTCAGAAGCATATTG
AAGATCGGCTGTCAGAGGAATTGTTAAAAGGAACTGTTTTAACAGGACAGAAAGTTGTCATTGATGTAGAAAATGAAGAG
TTTATTGTAAAAACAACGAAAACAGTAAATGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.79 |
99.877 |
0.867 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.444 |
99.753 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.026 |
100 |
0.478 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.898 |
100 |
0.476 |
| clpC | Streptococcus mutans UA159 |
45.724 |
100 |
0.475 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.535 |
99.63 |
0.464 |
| clpC | Streptococcus pneumoniae D39 |
46.535 |
99.63 |
0.464 |
| clpC | Streptococcus pneumoniae Rx1 |
46.535 |
99.63 |
0.464 |
| clpE | Streptococcus mutans UA159 |
53.506 |
80.888 |
0.433 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.774 |
78.422 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
53.532 |
78.545 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
53.532 |
78.545 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
53.532 |
78.545 |
0.42 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.236 |
76.202 |
0.406 |