Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NE424_RS19145 Genome accession   NZ_CP098795
Coordinates   3995528..3996469 (+) Length   313 a.a.
NCBI ID   WP_031965228.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain VB280821     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3990528..4001469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NE424_RS19135 (NE424_19135) basA 3990951..3992798 (+) 1848 WP_031965226.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  NE424_RS19140 (NE424_19140) basB 3992869..3994896 (-) 2028 WP_087937500.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  NE424_RS20835 - 3995397..3995528 (+) 132 WP_001218004.1 hypothetical protein -
  NE424_RS19145 (NE424_19145) ceuB 3995528..3996469 (+) 942 WP_031965228.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  NE424_RS19150 (NE424_19150) bauC 3996469..3997416 (+) 948 WP_001223282.1 ferric acinetobactin ABC transporter permease subunit BauC -
  NE424_RS19155 (NE424_19155) bauE 3997413..3998183 (+) 771 WP_031965229.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  NE424_RS19160 (NE424_19160) bauB 3998190..3999158 (+) 969 WP_001104125.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33989.07 Da        Isoelectric Point: 8.4665

>NTDB_id=601362 NE424_RS19145 WP_031965228.1 3995528..3996469(+) (ceuB) [Acinetobacter baumannii strain VB280821]
MQFGLFCIFILLCICSLLLGAEQIQWPTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=601362 NE424_RS19145 WP_031965228.1 3995528..3996469(+) (ceuB) [Acinetobacter baumannii strain VB280821]
ATGCAATTCGGCTTATTTTGTATTTTTATCCTTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCAAATACAGTGGCC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAACATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419