Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | K6754_RS01640 | Genome accession | NZ_CP082317 |
| Coordinates | 348863..349378 (+) | Length | 171 a.a. |
| NCBI ID | WP_005382766.1 | Uniprot ID | A0A2I3CBC3 |
| Organism | Vibrio alginolyticus strain SXV3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 343863..354378
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6754_RS01620 (K6754_01620) | - | 344006..346567 (-) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
| K6754_RS01625 (K6754_01625) | pilM | 346712..347728 (+) | 1017 | WP_213912483.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K6754_RS01630 (K6754_01630) | pilN | 347712..348287 (+) | 576 | WP_213912482.1 | PilN domain-containing protein | Machinery gene |
| K6754_RS01635 (K6754_01635) | pilO | 348280..348873 (+) | 594 | WP_064354357.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K6754_RS01640 (K6754_01640) | pilP | 348863..349378 (+) | 516 | WP_005382766.1 | pilus assembly protein PilP | Machinery gene |
| K6754_RS01645 (K6754_01645) | pilQ | 349404..351149 (+) | 1746 | WP_238974988.1 | type IV pilus secretin PilQ | Machinery gene |
| K6754_RS01650 (K6754_01650) | aroK | 351337..351855 (+) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K6754_RS01655 (K6754_01655) | aroB | 351888..352988 (+) | 1101 | WP_005382764.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19065.24 Da Isoelectric Point: 10.4342
>NTDB_id=601363 K6754_RS01640 WP_005382766.1 348863..349378(+) (pilP) [Vibrio alginolyticus strain SXV3]
MTSKSLLLVLMGSLLMGCQANDESLTDFIRGVETQARREVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMDNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
MTSKSLLLVLMGSLLMGCQANDESLTDFIRGVETQARREVEKLKPADKYVAVTYAPEVQRAPFELPKEATIATQPVARKD
CWQPPSRRRTGKLEKFPLSQLRLKGVMGMDNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=601363 K6754_RS01640 WP_005382766.1 348863..349378(+) (pilP) [Vibrio alginolyticus strain SXV3]
ATGACAAGTAAGTCTTTGTTGCTGGTACTGATGGGTTCTCTATTGATGGGTTGCCAGGCGAATGATGAATCATTGACGGA
TTTTATTCGAGGAGTGGAAACACAGGCGCGTCGAGAGGTCGAGAAGCTTAAGCCCGCAGACAAGTATGTTGCAGTCACGT
ACGCACCGGAAGTACAGCGTGCACCCTTTGAATTACCCAAAGAAGCCACCATCGCGACTCAGCCAGTTGCAAGAAAAGAT
TGTTGGCAACCGCCCTCAAGAAGGCGAACTGGAAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGGGTCAT
GGGCATGGATAACACGGTTTCTGGCCTCGTTCAGGCTCCCAATGGCACCGTCTATAAAGTTAAGCCGGGTCAATACCTTG
GACGCAATAATGGCAAAGTGACCCATGTCAGCCACTCCTATTTGTTGATTAATGAAACGTTGCCCGACGGCTTAGGATGT
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGACAAGTAAGTCTTTGTTGCTGGTACTGATGGGTTCTCTATTGATGGGTTGCCAGGCGAATGATGAATCATTGACGGA
TTTTATTCGAGGAGTGGAAACACAGGCGCGTCGAGAGGTCGAGAAGCTTAAGCCCGCAGACAAGTATGTTGCAGTCACGT
ACGCACCGGAAGTACAGCGTGCACCCTTTGAATTACCCAAAGAAGCCACCATCGCGACTCAGCCAGTTGCAAGAAAAGAT
TGTTGGCAACCGCCCTCAAGAAGGCGAACTGGAAAATTAGAAAAATTCCCATTAAGCCAATTACGTTTGAAAGGGGTCAT
GGGCATGGATAACACGGTTTCTGGCCTCGTTCAGGCTCCCAATGGCACCGTCTATAAAGTTAAGCCGGGTCAATACCTTG
GACGCAATAATGGCAAAGTGACCCATGTCAGCCACTCCTATTTGTTGATTAATGAAACGTTGCCCGACGGCTTAGGATGT
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
84.795 |
100 |
0.848 |
| pilP | Vibrio cholerae strain A1552 |
56.977 |
100 |
0.573 |