Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LC189_RS03365 Genome accession   NZ_CP098727
Coordinates   681595..682218 (+) Length   207 a.a.
NCBI ID   WP_001208756.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SauR3     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 676595..687218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LC189_RS03335 (LC189_003335) - 677569..678036 (-) 468 WP_000966142.1 CcdC family protein -
  LC189_RS03340 (LC189_003340) - 678130..678228 (-) 99 WP_001789897.1 hypothetical protein -
  LC189_RS03345 (LC189_003345) - 678215..678457 (-) 243 WP_000246909.1 YneF family protein -
  LC189_RS03350 (LC189_003350) recP/tkt 678735..680723 (-) 1989 WP_000481451.1 transketolase Machinery gene
  LC189_RS03355 (LC189_003355) - 680844..681083 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  LC189_RS03360 (LC189_003360) sosA 681219..681452 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  LC189_RS03365 (LC189_003365) dinR/lexA 681595..682218 (+) 624 WP_001208756.1 transcriptional repressor LexA Regulator
  LC189_RS03370 (LC189_003370) - 682598..683614 (-) 1017 WP_170957313.1 CAP domain-containing protein -
  LC189_RS03380 (LC189_003380) guaC 683636..684613 (-) 978 WP_000688136.1 GMP reductase -
  LC189_RS03385 (LC189_003385) rpsN 684770..685039 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  LC189_RS03390 (LC189_003390) rpmG 685493..685642 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23345.57 Da        Isoelectric Point: 4.8867

>NTDB_id=600976 LC189_RS03365 WP_001208756.1 681595..682218(+) (dinR/lexA) [Staphylococcus aureus strain SauR3]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNENINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=600976 LC189_RS03365 WP_001208756.1 681595..682218(+) (dinR/lexA) [Staphylococcus aureus strain SauR3]
ATGAGAGAATTAACAAAACGACAAAGCGAGATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGAAAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657